Poseidonibacter parvus: LPB137_08220
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Entry
LPB137_08220 CDS
T04722
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
alp
Poseidonibacter parvus
Pathway
alp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LPB137_08220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alp03400
]
LPB137_08220
DNA repair and recombination proteins [BR:
alp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LPB137_08220
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
APW65842
UniProt:
A0A1P8KMQ1
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All DBs
Position
1644941..1645693
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AA seq
250 aa
AA seq
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MAHYVLFDTETTGNKEEDRVIQFGAMILDQTGKVEAYNDFCSTNIDIKVEAMEVHNITPD
LLIGKPEATQTTFYKRLEELNTNENYIIAHNIAFDMGMIKKEGFVNQYKQIDTLRCAKHL
YPELPYHRLQYLRYALELYKTEEQEAAKHNIVIKAHDAIGDVLVMKLFLSKLVGKCREIY
PDYNPMEKLVELTSTPVFIKTFKFGKHKGKDIAEVAKEDSGYLNWMRTNMDLDEDLKYTL
DKVLGSDNNY
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcacattacgtactatttgatacagaaacaacaggaaataaagaagaagatagagtt
attcaatttggagcaatgatacttgaccaaacaggaaaagttgaagcttataatgacttt
tgttcaactaatattgatattaaagtagaagcaatggaagttcataatataactcctgat
ttactaattggaaaaccagaagcaacacaaactactttctataaaagattagaagagtta
aatacaaatgaaaactatataatagctcataatatagcttttgatatgggtatgattaaa
aaagaaggtttcgtaaatcaatataaacaaattgatacactaagatgtgcaaaacactta
taccctgaacttccttaccatagattacaatacttaagatatgctcttgaattatacaaa
acagaagagcaagaagcagctaaacataatattgtgataaaagctcacgatgcaattgga
gatgttttagttatgaaactatttttatcaaaattagttggtaaatgtagagaaatttat
cctgactataatccaatggaaaaactagttgaacttacatcaacacctgtatttatcaaa
acttttaaatttggtaaacataaaggtaaagatatagctgaagttgcaaaagaggactca
ggttatttaaattggatgagaacaaacatggacttagacgaagatttaaaatatacactt
gataaagttttaggatctgataacaactattag
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