Poseidonibacter parvus: LPB137_13630
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Entry
LPB137_13630 CDS
T04722
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alp
Poseidonibacter parvus
Pathway
alp03030
DNA replication
alp03430
Mismatch repair
alp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB137_13630
03430 Mismatch repair
LPB137_13630
03440 Homologous recombination
LPB137_13630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alp03032
]
LPB137_13630
03400 DNA repair and recombination proteins [BR:
alp03400
]
LPB137_13630
Enzymes [BR:
alp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB137_13630
DNA replication proteins [BR:
alp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB137_13630
DNA repair and recombination proteins [BR:
alp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB137_13630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
APW66829
UniProt:
A0A1P8KQN5
LinkDB
All DBs
Position
2803975..2807520
Genome browser
AA seq
1181 aa
AA seq
DB search
MSTTPQFTHLHLHTEYSLLDGANKIKPLAKKVKEMGMTSVAMTDHGNLFGAIDFYNAMKK
EGIKPIIGMEAYIHNNEELGDKTTRQRFHLCLYAKNQEGYKNLMFLSSQAYMHGFYYYPR
INKKLLAENSGGLVCSAACLQGEINWNLNTQNERNVKNGAKGYEGARKAALEYKEIFGDD
FYLEIMRHGIGDQHFVDDQILKLGRELDIKVVATNDTHYLNQKDADAHEAFMCIAMNKLY
DDPNRLRHSVHEFYLKTPEQIAKLYADIPEAITATQEIADKCNLEIKLGDPTPPNFKFTR
QKAEVNNLTLPEPELEYSLENDKILFIDECWRGLDKRLQIVDPSKHQEYKDRLQVEIDII
NGMKFPGYMLIVWDFVIVAKQMKIPVGPGRGSAAGSLVAFSLEITDIDPMPYGLLFERFL
NPERISMPDIDMDFCQARRGEIIDYVVEQYGRANVAQIITFGKLLAKGVIRDVARVLDMP
YSKADAMAKLIPDELGIDLTNSWEKEPKIKELCDADPQAGRVWEYALALEGLNRNAGTHA
AGVVISNEPLWNKTPLFKPSGLDTLATQYNGKYVEDVDLIKFDFLGLKTLTVIEEALQLI
EKRHGKRIDFLTADVNDKGVYDLIQTGNTIGLFQIESDGMQDLCKRLKPDNFEDIIAVLA
LYRPGPMESGMLDDFIDRKHGRAKIDYFYDEFDAPLRPILEPTYGVIVYQEQVMQIVQTI
GGFSLGGADLVRRAMGKKIVEEMDRLKGEFADGGVKKGYVRSHCEELFDLIVKFAGYGFN
KSHSAAYALVTFYTSYLKNYYPSEFMAALLTLEKDNTDKVVKYVDEVKRLDLELFPPDIN
KSDLVFSATKLEGNEVVMFGMGAVKGAGDVAIKSIIAARDEGGDFTDLADFISRIDGSKV
NKRVIESLTKTGAFDSFGYSRRAMLEQIEKISECVANSMKAKKMATGSLFGDSQELTKID
IVLDELEEFEAKEILEFEKASLGFYVSGHPLDEYREQLDQIKYTLSSQIEDLADGSQALF
VGKIENIVTKISKKGNKFGIASIIDLHGSIELLLFEDRIKELEDDFDLEKPIAFKVKISK
DENFTRMNIMKIESLKDAKKEKIKTKQKVEEEPPLTIAIPFTNNENSIYQLFDLVANNQG
KRDLKILVKSKLADIELESGFKINTNLEKLIHNIEGAFVVS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactacaccacaatttacacatttacatttacatacagaatactcactacttgat
ggggcaaacaaaataaaaccacttgcaaaaaaagtaaaagagatgggaatgacttctgtt
gcaatgacagatcatggaaatctttttggagcaattgatttttataatgccatgaaaaaa
gaaggtattaaacctattattggaatggaagcatatattcataataatgaagaattaggc
gataaaacaaccagacaaagatttcacttatgtctatatgcaaaaaaccaagaaggttat
aaaaacttaatgtttttaagctcacaagcttatatgcatgggttttattactatccaaga
attaataaaaaacttttagcagaaaactcaggcggacttgtatgttctgctgcttgttta
caaggtgaaattaactggaatttaaatactcaaaatgaaagaaatgtaaaaaacggtgca
aaaggatatgaaggtgctagaaaagcagcactagaatataaagaaatttttggagatgac
ttttatttagaaatcatgcgtcatggaattggtgaccaacattttgttgatgaccagatt
ttaaaacttggacgagaacttgatattaaagtagttgcaactaatgatacacattattta
aaccaaaaagatgcagatgcacatgaagcatttatgtgtattgctatgaataaactttat
gatgatccaaatagattaagacattctgtacacgaattttatttgaaaacaccagaacaa
attgcaaaactatatgctgatattcctgaagcaataacagcaacgcaagaaattgctgat
aaatgtaatttagaaataaaactaggagatccaactcctccaaacttcaagtttacaaga
caaaaagcggaagtaaataatttaactcttccagaaccagagcttgaatattctcttgaa
aatgataaaattttatttattgatgagtgctggagaggactcgataaaagacttcaaatt
gtagatccttcaaaacatcaagaatataaagacagactacaagtagaaattgacattatc
aatggaatgaaattcccagggtatatgcttattgtttgggatttcgtaatcgttgcaaaa
caaatgaaaattccagtaggtccaggaaggggttcagcagcaggaagcttagtggctttt
tcactagagattaccgatattgacccaatgccttatggtttactttttgagagattctta
aatcctgaaagaatatctatgccagatattgatatggatttttgtcaagcaagacgtggt
gaaattattgattatgtagttgaacaatatggacgagcaaacgttgctcaaattattacc
tttggtaaacttcttgcaaaaggtgtaattagagatgtcgctcgtgttttagacatgcca
tattcaaaagcagatgcaatggcaaaactaattcctgatgaattaggaattgaccttaca
aattcatgggaaaaagaaccaaaaataaaagaactatgtgatgctgatccacaagcagga
agagtttgggaatatgcactagccttagaaggtcttaatagaaatgcaggaacacacgca
gctggtgttgttatttcaaatgagcctttatggaataaaactcccttatttaaaccctca
ggacttgatacactagcaactcaatataatggtaaatatgttgaagatgttgatttaatt
aaattcgatttccttggattaaaaactttaacagtaattgaagaagctttacaacttatt
gaaaaaagacacggaaaaagaattgacttcttaacagcagatgtaaatgataaaggtgtt
tatgaccttattcaaacaggaaatacaattgggctattccaaatagaatcagatggtatg
caagatttatgtaaaagattaaaacctgataattttgaagatattattgccgttctagca
ctttatcgtccaggtccaatggagtcaggaatgcttgatgactttattgatagaaaacat
ggtcgtgctaaaattgactatttctatgatgagtttgatgcacctttaagaccaattcta
gagccaacttatggagttattgtatatcaagagcaagttatgcaaattgtacaaactatt
ggtggattcagtcttggtggtgcagaccttgtaagacgagccatgggtaaaaagattgtt
gaagaaatggacagattaaaaggtgagtttgcagatggtggagttaaaaaaggttatgta
agaagtcactgtgaagagttattcgaccttattgtaaagtttgctggatatggatttaat
aaatctcactcagcagcgtatgcccttgtaacattttatacttcttatttaaaaaactat
tatccatcagaatttatggcagcacttctaacattagaaaaagataacacagacaaagtt
gtaaaatatgttgatgaagtaaaaagattagacttagaacttttcccacctgatattaat
aaatcagatttagtattttctgcaactaaacttgaggggaatgaagttgtaatgtttgga
atgggtgctgtaaaaggtgctggagatgttgctattaagtctattattgctgcacgtgat
gaaggtggagattttacagatttagctgattttatttcaagaattgacggaagtaaagta
aataaaagagtaatagaatctttaacaaaaacaggagcttttgatagctttggttattca
agaagagccatgcttgagcaaattgagaagatttctgagtgtgttgcaaactctatgaaa
gccaagaaaatggcgacaggttcactctttggagattcacaagagcttacaaaaattgat
attgttttagatgaacttgaagagtttgaagcaaaagagatactagagtttgaaaaagct
tcattaggattttatgtatcagggcatccacttgatgaatatagagaacaattagatcaa
attaaatataccctttcttctcaaattgaagatttagcagatggttcacaagctttgttt
gtagggaagattgaaaatatagttacaaaaatatcaaaaaaaggtaataaatttggaatt
gcttctattatagatttacacggaagtattgagcttttattatttgaagatagaattaaa
gagcttgaagatgattttgatttagaaaaaccaattgcatttaaagtaaaaatctcaaaa
gatgaaaacttcacaagaatgaacatcatgaaaattgaaagtttaaaagatgcaaaaaaa
gagaaaattaaaacaaaacaaaaagtagaagaagagccacctttaacaattgctattcca
tttacaaacaatgaaaatagtatctaccaactctttgatttagtggcaaataatcaaggg
aaaagagacctaaaaatattagtaaaatcaaaacttgcagatattgaacttgaaagtggt
tttaagataaatactaatttagaaaaattaattcataatatagaaggagcttttgtagtt
tcatga
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