Pseudoprevotella muciniphila: C7Y71_001210
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Entry
C7Y71_001210 CDS
T06230
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alq
Pseudoprevotella muciniphila
Pathway
alq03030
DNA replication
alq03430
Mismatch repair
alq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7Y71_001210
03430 Mismatch repair
C7Y71_001210
03440 Homologous recombination
C7Y71_001210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alq03032
]
C7Y71_001210
03400 DNA repair and recombination proteins [BR:
alq03400
]
C7Y71_001210
Enzymes [BR:
alq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7Y71_001210
DNA replication proteins [BR:
alq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C7Y71_001210
DNA repair and recombination proteins [BR:
alq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C7Y71_001210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Intimin_C
SSSPR-51
DUF6282
PIN
Motif
Other DBs
NCBI-ProteinID:
QFQ11752
UniProt:
A0A5P8E481
LinkDB
All DBs
Position
complement(286027..289839)
Genome browser
AA seq
1270 aa
AA seq
DB search
MQDFVHLHVHTQYSILDGQASIQKLIDKAVKDGMRGFAVTDHGNMMGIKEFFDVSMKTRN
KGAALLKEAKEKLETLQQQGAGEAAIEEVRNQIAKHERQANFMPIFGCEMYVARRDMKTK
ETKEDMGGNHLIVLAKNSTGYHNLVKLVSNAWVDGYYMRPRTDHAELEKYHEGLIVCSAC
VAGEVPNKILNDDIKGAEESVLWFKKVFGDDYYLELQRHKVTDPQQRANREAYELQSKVN
PVLIDLASKHNIKLICSNDVHFVDEENADAHDLLICLSTGKDLNDPNRMLYSKQEWFKTR
AEMNAIFSDVPEALSNTIEVINKVEFYDINHAPIMPNFEIPEDFGTEEGYRAKLTEEDLF
KEFTCDENGNVIMSEEEGRKKISKLGGYDKLYRIKLEADYLGKLAYEGAKRRYGEPIPDN
VAEQVKFELHIMKTMGFPGYFLIVQDYIAAARNELDVSVGPGRGSAAGSVVAYCLGITQV
DPIKYDLLFERFLNPDRISLPDIDVDFDDDGRDRVLQWVTDKYGAENVAHIITFGTMQTK
MAIKDVARVEKLPLSVSNELCKQIPDRLPNGPDGKPTKMNLENVVKYVPEFQRAEASDNP
LLRDTIRYAKMLEGNVRNTGVHACGFIICRDKISDWVPVSVAADKGGEKLHCTQYEGKVI
EDTGLIKMDFLGLKTLSIIKETLSNIKDSLGVEIDIENIDIEDPATYQLYCDGSTIGTFQ
FESTGMQRYLRELQPSTFEDLIAMNALYRPGPMAYIPQFIARKQGKEAIVYDLDCMEDYL
KDTYGITVYQEQVMLLSRKIANFTRGESDTLRKAMGKKLINKLNEMYPKFISGGKSNGHD
EKTLEKIWNDWRAFASYAFNKSHATCYSWVAYQTAYLKAHYPAHYMAAVMSRNLDNISEI
SKLMDECKIMGIRTLSPDVNESRRKFSVNENGDIRFGLAAIKGVGSGAADAIIEERLKNG
PYNSPYEFMERCNFSAVNRKSIESLVLAGAFDSFSEYKREQYVTPAPKGGDFLDVLIRYG
NHFQQDKQNQQQSLFGTNAIEVAHPPFPEEYATWSDLERLNKEKDLIGIFISSHPLQEYK
VIVEKVCNTRFSQIDNLAALKKQDVTLGGIVTSVKSGNDRNGRPYGIAKLEDFEGSGELK
LWGEDWARWGGYMTIGSYLFVRAKVMQKRFGNDLFLQINDIKYMSDIKSTAINDITIHLN
LNNADASTITELSSILKEHKGDVPLYFSVSGMETTHPVLLRSGNLSVDVTGHFVDKLDMI
NGIKYTINER
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttcgttcatcttcacgtacatacacaatactccatacttgatggccaggcg
tctatacagaaactgatagacaaggctgtaaaggatggtatgcggggctttgccgttacc
gaccacggaaacatgatgggcatcaaggaattctttgatgtcagcatgaaaacgcgcaac
aagggtgctgcactgctgaaagaagcaaaggagaaactggaaacgctacagcaacaaggc
gctggcgaggcagcaatagaagaagtgagaaaccaaatcgccaagcacgaacggcaggca
aactttatgcccatcttcggatgtgagatgtacgtggcgcggcgtgacatgaaaaccaaa
gaaaccaaagaggacatgggtggtaaccacctgattgtgctggcaaaaaacagcacaggc
taccacaatcttgtaaaactcgtgtccaacgcctgggtggacggctattacatgcgtccg
cgcacggaccatgctgagttggaaaaatatcatgaggggctcattgtatgctctgcatgt
gtggcaggcgaggtgcctaataaaatcttaaacgacgacataaaaggggctgaggaaagt
gtgctgtggttcaaaaaggtatttggcgacgactattatctcgaacttcagagacacaag
gtaaccgacccgcaacagcgtgccaaccgcgaggcatacgagttgcagtccaaagtaaat
cctgtactcatcgacctcgcaagcaaacacaacatcaaactcatctgcagcaacgacgtt
cactttgttgacgaagagaatgccgatgcacacgaccttctcatctgtctgagtaccggc
aaggacctcaacgaccccaaccgcatgctctacagcaaacaggaatggttcaagacacgt
gcggagatgaatgccatcttcagcgatgtgcccgaagcactgtcgaataccatagaagtc
ataaacaaggtggagttttacgacatcaaccacgcacccattatgccgaacttcgagatt
cctgaagacttcggcacagaggaaggctatcgcgcaaaactgacagaagaagacctcttc
aaagaatttacgtgcgacgagaatggcaatgtgattatgtcggaggaagaagggcgcaaa
aagatttcaaaactcggcggatacgacaaactctaccgcatcaaactcgaagccgactat
ctcggcaagttggcatacgagggcgctaaacggagatatggcgagcctatccctgacaat
gtggcagagcaggtgaagttcgagttgcacatcatgaagacgatgggcttcccgggctac
ttccttattgttcaggactacatagcagccgcccgaaatgaactggacgtgagtgtaggt
cccggacgtggcagtgcggcaggcagtgtcgtggcatattgtctgggcatcactcaggtt
gaccccatcaagtacgacctgctgtttgagcgcttcctgaatcccgaccgtatatcgctt
cctgatattgacgtagatttcgacgacgacggcagagaccgtgtcctgcaatgggtaacc
gacaagtatggcgcagaaaacgtggcgcatatcatcacgtttggcacgatgcagacgaaa
atggccatcaaggacgtggcacgcgtggagaaactaccactttctgtcagcaacgaactg
tgcaaacaaattcctgacagactgcccaacggtcccgacggtaagccaacaaagatgaat
ttagagaatgtcgtgaagtacgtacctgagtttcaaagagcagaagcgtccgacaacccg
ttgctccgcgacacaatccgctatgccaagatgctcgaaggcaatgtgcgcaacacaggc
gtacatgcctgcggctttatcatctgccgcgacaagatcagcgactgggtgccagtgagt
gttgccgcagacaagggaggagagaaactccactgtacgcaatacgaaggaaaagtcatc
gaggacacgggacttatcaagatggactttctcgggctcaagacgctgagcatcatcaaa
gaaaccctgagcaacatcaaggacagtctcggtgtggaaatagacattgaaaacatcgat
attgaagaccctgccacataccaactctactgcgacggcagcaccatcggtactttccag
tttgaatcgacaggtatgcagcgctatctgcgcgaacttcaaccttccacattcgaggac
ctcattgccatgaatgcgttgtatcgccccggacctatggcatacataccgcagtttatt
gcgaggaaacaagggaaagaggctatagtgtacgacctcgactgcatggaggactacctc
aaagacacgtacggcatcacggtgtatcaggagcaggtgatgcttctgtcgagaaagatt
gccaacttcacgcgtggcgagagcgacaccctgcgtaaagcaatgggtaagaagttgatt
aacaagttgaacgaaatgtatccaaagttcatttccggcggaaaatcaaacggtcatgac
gagaaaactttggaaaaaatctggaacgactggcgcgcctttgcttcctacgccttcaac
aagagccacgccacatgctattcgtgggtggcttatcagaccgcttatctgaaagcccac
taccctgctcattacatggcagccgtcatgagtcgcaacctcgacaacatctctgagata
tcaaaactgatggacgaatgcaaaataatgggtattcgcactttgtcgccagacgtgaat
gagagccggcgcaaattcagtgtcaacgaaaacggcgacatacgtttcggactcgctgcc
attaaaggcgtgggaagcggcgcagcagatgccatcatagaagaacgcctgaagaatggt
ccatacaactctccatacgaatttatggaaaggtgtaatttcagtgccgtcaaccgtaag
agtatagaaagtctggttcttgcaggtgctttcgacagtttctccgaatacaaacgtgaa
caatatgtcacacctgccccgaaaggcggcgatttccttgatgtgctcatcagatatggc
aaccatttccagcaggacaagcaaaatcagcaacaatcgctctttggcacaaatgccata
gaagtggcgcatcctccatttccagaagaatatgccacatggagcgaccttgaaagacta
aacaaagaaaaggaccttattggtatctttatttcaagccatccgcttcaggaatacaaa
gtcatcgttgagaaagtttgcaacacacgcttttctcagattgacaacttagcggctttg
aagaaacaagacgtaacacttggcggcattgtaacatccgtcaaaagcggcaatgacagg
aacggccgcccttatggcatagcaaaactggaagatttcgaaggatccggagaactgaaa
ctctggggcgaggactgggcacgctggggcggatatatgacgattggcagttatctgttt
gtcagagcaaaggtgatgcagaaacgctttggtaacgatttgttcctgcaaatcaacgac
ataaaatacatgagcgacatcaaatctacagcaataaacgacatcaccatacacctgaac
ctcaacaatgctgatgcatccacaataacagaactgtcgtccatattgaaagaacataag
ggcgatgtgccgctctacttctctgtctccggcatggagacgacacaccccgttctgctc
aggtcgggcaacttgtcagtggacgttacgggacacttcgttgacaaactcgacatgatt
aacggcataaaatatactataaacgaaagatag
DBGET
integrated database retrieval system
