Alteromonas sp. RKMC-009: DS731_00075
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Entry
DS731_00075 CDS
T05653
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
alr
Alteromonas sp. RKMC-009
Pathway
alr03030
DNA replication
alr03410
Base excision repair
alr03420
Nucleotide excision repair
alr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DS731_00075 (polA)
03410 Base excision repair
DS731_00075 (polA)
03420 Nucleotide excision repair
DS731_00075 (polA)
03440 Homologous recombination
DS731_00075 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alr03032
]
DS731_00075 (polA)
03400 DNA repair and recombination proteins [BR:
alr03400
]
DS731_00075 (polA)
Enzymes [BR:
alr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DS731_00075 (polA)
DNA replication proteins [BR:
alr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DS731_00075 (polA)
DNA repair and recombination proteins [BR:
alr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DS731_00075 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DS731_00075 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AYA66392
UniProt:
A0A385N323
LinkDB
All DBs
Position
complement(14794..17571)
Genome browser
AA seq
925 aa
AA seq
DB search
MSENKTPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVINMLRSLIRQYNPTHMAV
VFDAKGKTFRDDMYKEYKANRPPMPEELRSQIAPLHDIIRAMGLPIIVEEGVEADDVIGT
LSRQATEKGIDTLISTGDKDMAQLVNEHVTLINTMNNQIMTTEGVKEKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGIKDIYENLDAIAGLSFRGSKTMADKMREYE
EQARLSYDLATIKLDVEMDFQPETLVPSEADNTKLAALFAEYEFKRWFSEVSSESAAEES
ATSAETDDSNGEDDSPALSDIDKNKYETVTDKAAFENWLKKLEQAPLFAFDTETTSLDYM
EAEIVGVSFSTAPGEAAYVPVAHDYPDAPEQLDRDYVLGALKPLLESDSVKKVGQHLKYD
KNVLANYDINLQGIAFDTMLESYVLNSTATRHDMDSLAMAYLNHKTIHFEEIAGKGAKQL
TFNQIDLNEAAPYAAEDADVTLRLHEEIWRRLEQHEPLKNLLLDVEVPLASVLSRMEQLG
VLIDSQKLNQQSQDLAKRITELEASVHEAAGETFNLGSTKQLQQILFEKLSLPVIKKTPK
GAPSTSEEVLQELALDYPIPKMIMEYRGLTKLKNTYTDKLPKMINHRTGRVHTSYHQAVT
ATGRLSSTDPNLQNIPIRTEEGRRVRQAFVPRDGYKIVAADYSQIELRIMAHLSEDQGLL
DAFSQGKDIHKATASEVFSVPLEEVTADQRRSAKAINFGLIYGMSAFGLSRQLNIPRNDA
QKYMDLYFERYPGVLRYMDETREHAKETGYVETVFGRRLYLPDIKASNGARRKGAERAAI
NAPMQGTAADIIKLAMLRVDEWIQKEAASDVFMMMQVHDELVFEIKEEVLEERVASIVAL
MEQAAALSVPLQVEAGTGENWDEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaacaaaactcctccctttattctggttgacggatcttcttacctgttccgc
gctttccacggtttacctccactgacaaattctaaaggtcaggataccggtgcgatttac
ggtgtgatcaacatgctgagaagccttatccgccagtacaaccccactcacatggcggta
gtcttcgatgccaaaggaaaaaccttccgcgacgacatgtataaagaatacaaggcaaac
cgtccgccgatgccggaagaattacgatctcagattgcacctttgcatgacattatcagg
gcaatgggcttgccgatcatcgtggaagaaggcgtagaagccgatgatgtgatcgggacc
ctttcacgtcaggccaccgaaaaagggatcgacacacttatcagtacaggtgacaaagat
atggctcagctggtcaatgagcatgtcacgctgatcaataccatgaacaaccagatcatg
acgactgaaggtgttaaagaaaaattcggtattcctccggagctggttattgatttcctg
gcccttaaaggggacaaagttgataacattccgggcgtgccgggagtgggcgacaaaagt
gcacaggcactgctgaacgggatcggtggcattaaagacatttatgagaatctggacgcg
atcgcaggcctttcattccgtggcagcaaaaccatggctgataagatgcgtgagtatgaa
gagcaggcgcggttatcttatgatctggcgacaataaagctggatgttgagatggatttc
cagccggaaacgctggtgccgtcggaagctgataatacaaagcttgccgccctgtttgcc
gaatatgagtttaagcgctggttttctgaagtctcatccgaatcagccgcagaggaatct
gctaccagcgcggaaactgacgacagtaacggtgaagacgactctcctgcactgtcagac
atcgacaaaaacaaatacgaaaccgttacagataaagcggcttttgaaaactggctgaag
aaactggaacaggctccactttttgcttttgatacagagaccaccagtctcgattatatg
gaagctgaaattgttggtgtatctttcagtacagcccccggagaagccgcttacgtaccg
gtagcacatgactatcctgatgcaccggagcaacttgaccgcgattatgtgcttggtgca
ttaaagccgttgctggagtcagattcagttaaaaaggttggccagcatctgaagtacgac
aaaaacgtcctggccaattacgacatcaatttgcagggcattgcttttgacaccatgctt
gagtcttatgtgcttaacagcacagcaacccgccatgacatggactcactggcgatggcg
tacctgaatcacaaaacaatccactttgaagagattgccggtaagggagcgaagcaactt
acctttaatcagattgatttgaacgaagccgcgccctatgccgccgaagatgcagacgtt
actttaaggttgcatgaagaaatctggcgccggctggaacagcacgaaccactgaaaaat
ttattactggatgtcgaagtgccactggccagcgtactgtccaggatggaacagttgggc
gtgctgatagattcacaaaagctgaatcagcaaagccaggatctggctaagcgtataact
gaactggaagccagtgtgcatgaagccgcgggtgaaacatttaacttaggttcaactaaa
cagctgcaacagattctgtttgagaaattgtcattgcctgtgatcaagaaaacgcccaaa
ggcgccccgtctacgtcggaagaggtattacaggaactggcgctggactaccctattcct
aaaatgatcatggaataccgtggcctcaccaagcttaaaaatacttacacagacaagctg
ccaaagatgatcaatcaccgtacaggccgtgtgcatacgtcttatcatcaggcagtcacc
gcaacgggacggttgtcttctacggatcctaacctgcagaacatccctatccgcactgaa
gaaggccgcagagtacggcaagcgttcgtgccacgggacggttataagattgtcgccgcg
gattactcacaaatagagctgcgtattatggctcatctttctgaggatcagggtctgctt
gatgcgttctctcaggggaaagacatacataaggccactgcgtctgaagtgttttcagtg
cctcttgaggaagtaactgcagatcagcgccgcagcgcgaaagctataaacttcggactg
atatacggcatgtcagcttttggtttgtccagacaactgaatattccccgcaacgacgca
caaaaatacatggatttgtattttgaacgttatccgggcgtactgcggtatatggatgaa
acccgtgagcatgcgaaagaaaccggctatgttgaaacggtattcgggcgcagactgtat
ctgcctgacattaaagcaagtaacggtgcccgccggaaaggtgcagaacgtgcggcaatc
aatgctcctatgcagggtacagcggctgacatcatcaaactggcaatgctgcgtgttgat
gagtggatccaaaaagaagccgccagtgatgtattcatgatgatgcaggttcacgatgaa
ctggtttttgaaattaaagaagaagtgttggaagaacgcgttgccagcattgtagccctg
atggaacaggctgctgccctgtctgtacctttacaggttgaagccggcacgggagaaaat
tgggacgaggcgcactaa
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