Alteromonas sp. RKMC-009: DS731_00245
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Entry
DS731_00245 CDS
T05653
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
alr
Alteromonas sp. RKMC-009
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alr03000
]
DS731_00245 (slmA)
03036 Chromosome and associated proteins [BR:
alr03036
]
DS731_00245 (slmA)
Transcription factors [BR:
alr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
DS731_00245 (slmA)
Chromosome and associated proteins [BR:
alr03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
DS731_00245 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TPR_22
HTH_11
HTH_20
TetR_C_15
HTH_24
DUF6262
HTH_23
Ubiquitin_5
HTH_AsnC-type
TetR
HTH_10
Ribosomal_S30AE
HTH_Tnp_1_2
TetR_C_37
Motif
Other DBs
NCBI-ProteinID:
AYA62563
UniProt:
A0A385MQA0
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All DBs
Position
complement(53865..54452)
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AA seq
195 aa
AA seq
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MPAVKKTNRRAQILQALAGMLETHQGQRITTAKLAEKVGVSEAALYRHFPSKARMFEGLI
EFIEETLFSRINKILNEEKDSAARCQLILHLLLGFAEKNPGITRILNGDALMGEQDRLRA
RIAKLFERLETQLKQILRERKLREGKTLAADEGVVANMMICYVDGRINQFIRSGFTRKPT
EQFNEQWQMFRQVFI
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgtaaagaaaacaaaccgtcgggcccagatacttcaagcactggccggcatg
ctggaaacgcaccagggccagcgcatcacaaccgcgaaactcgctgaaaaggtgggtgta
tcagaagcggcactttatcgtcacttcccaagtaaagcccggatgttcgaagggctcatc
gaatttattgaagaaacgttattctcccgtatcaataaaattctgaacgaggaaaaggac
tcagcagcacggtgccagctcattttgcacttgttactgggctttgcagagaagaatccg
ggtataacccgcatcttaaacggcgatgccctgatgggtgaacaggaccgcttgcgtgca
cggattgccaagttattcgaaaggctggaaacccaactgaagcaaattttgcgtgaacgc
aagttacgggaaggtaaaacgctggctgcagacgaaggtgtagtagccaatatgatgatt
tgttatgtcgacggccggataaaccagttcatccgcagtggttttacccgcaagcctact
gagcagttcaacgaacaatggcagatgttcagacaggtctttatctga
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