Alteromonas sp. RKMC-009: DS731_02015
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Entry
DS731_02015 CDS
T05653
Name
(GenBank) response regulator transcription factor
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
alr
Alteromonas sp. RKMC-009
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alr03000
]
DS731_02015
Transcription factors [BR:
alr03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
DS731_02015
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Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
HTH_7
HTH_23
DUF6115
HTH_40
HTH_24
Sigma70_r4
ABC_tran_Xtn
HTH_11
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AYA62879
LinkDB
All DBs
Position
470832..471521
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AA seq
229 aa
AA seq
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MLSKNQKFGVYLISKSLSSDEASDDQVILFKHLLQTCGYEITELTSIEQLETTSNQDLIF
YDAAKAEEKMEAFYRYQGFARWILFNLEHGDIDECEAIIAGVEGTFYTSDSPELLLKGVR
RLAKMDVWFKRNSINEALRRLRQQTRKANTAISRPKELNKMALHPKLTKREVTIIELVAQ
GSQNQEIADQLHISVNTVKTHIYSIFRKTHSRNRIELLSWSQQFVSEYS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcaaaaaccagaagtttggtgtctatctgatatccaaatccttatcttcagat
gaagcaagcgacgatcaggtcatccttttcaagcatcttttgcaaacctgtggttatgaa
atcacagaactcacgtctatagaacagttagaaaccacctccaatcaggatcttattttt
tacgatgccgctaaggctgaagaaaaaatggaagcgttttaccgttatcagggctttgcc
cgctggattctgtttaatctggaacacggcgatattgatgaatgtgaggctatcattgcg
ggtgtggagggaaccttctatacctctgactcacctgaattattactgaaaggtgtgcgc
cggctggccaaaatggatgtgtggtttaaacgcaattccattaacgaggcattgcgccgg
ttgcggcaacaaacccgtaaagctaatacggctatttcccgtcccaaagagttaaataaa
atggcactgcatcccaagcttaccaagcgggaagtcaccattattgagctggtggcgcag
ggttcacagaaccaggaaatcgctgatcagctgcatatcagtgtgaatacggtaaaaacg
catatatacagtattttccgtaaaacccattcgagaaaccggattgagttgctgtcgtgg
tcacagcaattcgtcagtgagtactcctga
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