Alteromonas sp. RKMC-009: DS731_02195
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Entry
DS731_02195 CDS
T05653
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
alr
Alteromonas sp. RKMC-009
Pathway
alr00300
Lysine biosynthesis
alr00470
D-Amino acid metabolism
alr01100
Metabolic pathways
alr01110
Biosynthesis of secondary metabolites
alr01120
Microbial metabolism in diverse environments
alr01230
Biosynthesis of amino acids
Module
alr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DS731_02195 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DS731_02195 (lysA)
Enzymes [BR:
alr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DS731_02195 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
WelO5
Glyco_hydro_101
Motif
Other DBs
NCBI-ProteinID:
AYA62912
UniProt:
A0A385MSY5
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All DBs
Position
complement(513763..515013)
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AA seq
416 aa
AA seq
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MDFFAFQNGRLFAEDVAVSDIAKAHGTPAYIYSRATLERHWHAFDQALGGHPHLICYAVK
ANSNLGVLSVLAKLGSGFDIVSGGELARVLEAGGDAKKVVFSGVGKKPEEIRYALEKGIL
CFNVESEPELERINSVAAEMGVKAPISLRINPDVDAKTHPYISTGLKANKFGIPRERAVA
TYELAASLSNLEVKGMDCHIGSQLTSIEPFVDALERLLKLIDELAAKGITISHLDVGGGL
GVTYNNETPPHPKEYAAAMVEKMAGRENLKMIMEPGRAIAANAGIMITEVEFVKEGDEKH
FAIVDAAMNDLIRPSLYSAWQNIVRVEQETDATPRIYDVVGPICETGDFIGKDRELAIKP
GDLLAVRSAGAYGFVMASNYNSRCRPPEIMVDGDQVIVVRERENQKDLWKGECKLT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggattttttcgcttttcaaaacgggcgactgtttgctgaagatgtagcagtatctgac
atcgctaaagcacacggtacacccgcgtatatttattcccgcgccacccttgagcgtcac
tggcatgcatttgaccaggcactgggcggacaccctcacctgatttgttacgccgtaaaa
gccaattcaaacttaggcgtgctgagcgtcctggcaaaattaggttcaggctttgacatc
gtatccggcggggaactggcacgggtactggaagccggtggtgatgcaaagaaagtggta
ttttccggtgtaggcaaaaagcctgaagaaattcgttatgcgctggagaaaggcattctg
tgtttcaacgttgagtctgaaccggaactggagcgcattaacagcgttgccgcagaaatg
ggcgtaaaagctcctatttcattgcgtattaatccggatgtggacgccaaaactcacccg
tatatctccacgggactgaaagcgaataaatttggtattccccgcgaacgtgccgttgcg
acttacgaactggccgccagtctgtcaaaccttgaagtaaagggcatggactgccacatt
ggttctcagctgacctctattgagccgtttgttgatgcccttgaaagattattaaagctc
attgatgagcttgccgctaaaggtattaccatttcccaccttgatgtgggtggtggcctg
ggcgtgacttacaataacgaaacaccgcctcatccgaaagaatacgccgccgccatggta
gaaaagatggctggccgcgaaaacttaaagatgatcatggagcccggccgcgctattgct
gcgaatgccggcattatgatcaccgaagttgaattcgtgaaagaaggcgatgaaaaacac
ttcgccatcgttgacgctgcgatgaatgatttaatccgcccgtcgttatattcagcctgg
cagaacatcgtacgtgttgagcaggaaaccgatgccacaccacgtatttacgatgtggtg
ggaccgatttgtgaaaccggtgatttcatcggtaaagaccgtgaactggcaataaaaccg
ggagacttactggcggttcgcagcgccggcgcctatggttttgttatggcctcaaactac
aacagccgctgccgcccgccggaaattatggtggatggtgaccaggtaattgtggtgcgt
gaacgagaaaatcaaaaagatctctggaaaggtgagtgcaaacttacgtaa
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