Alteromonas sp. RKMC-009: DS731_02730
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Entry
DS731_02730 CDS
T05653
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
alr
Alteromonas sp. RKMC-009
Pathway
alr00521
Streptomycin biosynthesis
alr00523
Polyketide sugar unit biosynthesis
alr00525
Acarbose and validamycin biosynthesis
alr00541
Biosynthesis of various nucleotide sugars
alr01100
Metabolic pathways
alr01110
Biosynthesis of secondary metabolites
alr01250
Biosynthesis of nucleotide sugars
Module
alr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DS731_02730 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DS731_02730 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DS731_02730 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DS731_02730 (rfbB)
00525 Acarbose and validamycin biosynthesis
DS731_02730 (rfbB)
Enzymes [BR:
alr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DS731_02730 (rfbB)
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Ortholog
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
KR
NmrA
NAD_binding_10
Sacchrp_dh_NADP
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
AYA63009
LinkDB
All DBs
Position
625975..627057
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AA seq
360 aa
AA seq
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MSKTILVTGGAGFIGSAVVRHLINDTDHTVINVDKLTYAGNLESLTTVSDSNRYFFEKVD
ICDADEVKRVFTTHQPDIVMHLAAESHVDRSIDGPGEFIQTNVVGTYTLLEQARAYWSQL
EGDKKDGFKFHHISTDEVYGDLPHPDEVEEGTGLPLFTETTPYAPSSPYSASKASSDQLV
RAWLRTYKLPTLVTNCSNNYGPYHFPEKLIPLVILNALAGKDLPVYGKGNQIRDWLYVED
HARALVVVALNGEIGETYNIGGHNEKQNIDVVKTICTILDDVKPKSTRYAEQITYVTDRP
GHDMRYAIDASKIQKELGWTPQETFESGIRKTVEWYLNNEAWWKAVLDGSYQGERLGAGN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaactatactagtcaccggcggtgccggcttcatcggttcggcggtagtccgc
cacctgattaacgatactgaccatacggttatcaacgtagataaactgacttatgccggt
aacctggaatcactgactaccgtgtcagacagcaaccgctacttcttcgagaaagtcgat
atctgcgatgccgacgaagtaaaacgtgtattcacgacacaccagcctgacattgtcatg
cacctggcagcagaatcccacgttgaccgctctatcgacggcccgggtgaatttatccag
actaatgtcgtcggtacttacacgttgctggagcaggcacgcgcgtactggtcacagctg
gaaggcgataagaaagacggctttaaattccaccacatctccaccgatgaagtgtacggc
gacctgccacatccggatgaagtggaagagggcaccggactgccactgtttactgaaaca
acgccctacgcgccgagctccccctattccgcgagtaaagcgtcttcagaccagttggtc
cgcgcctggctgcgtacttacaagctgcccacgctcgtgaccaactgctcgaataactac
ggtccgtatcacttcccggaaaaacttattccgctggttattctgaatgccctggccgga
aaagatttacctgtctatggtaaaggcaatcaaatccgtgactggctgtatgtggaagac
catgcccgcgcactggttgtggtcgccctgaacggtgaaatcggtgaaacctataacatt
ggcggccataatgagaaacagaatatcgacgtggtaaaaaccatctgcaccattctggat
gacgtgaagccaaaaagtaccaggtacgcagagcaaatcacttacgtgacagaccgtcca
ggccacgatatgcgctatgccatcgatgcctccaagattcagaaagaactgggctggacc
ccgcaggaaaccttcgaaagcggtatccgtaaaactgtcgagtggtacctcaacaatgaa
gcctggtggaaagctgtgctagacggtagctatcagggtgagcgtcttggggccggaaat
taa
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