Alteromonas sp. RKMC-009: DS731_03315
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Entry
DS731_03315 CDS
T05653
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
alr
Alteromonas sp. RKMC-009
Pathway
alr00071
Fatty acid degradation
alr00280
Valine, leucine and isoleucine degradation
alr00310
Lysine degradation
alr00362
Benzoate degradation
alr00380
Tryptophan metabolism
alr00410
beta-Alanine metabolism
alr00640
Propanoate metabolism
alr00650
Butanoate metabolism
alr00907
Pinene, camphor and geraniol degradation
alr00930
Caprolactam degradation
alr01100
Metabolic pathways
alr01110
Biosynthesis of secondary metabolites
alr01120
Microbial metabolism in diverse environments
alr01200
Carbon metabolism
alr01212
Fatty acid metabolism
Module
alr_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DS731_03315 (fadB)
00650 Butanoate metabolism
DS731_03315 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
DS731_03315 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DS731_03315 (fadB)
00310 Lysine degradation
DS731_03315 (fadB)
00380 Tryptophan metabolism
DS731_03315 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DS731_03315 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DS731_03315 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DS731_03315 (fadB)
00930 Caprolactam degradation
DS731_03315 (fadB)
Enzymes [BR:
alr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DS731_03315 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DS731_03315 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DS731_03315 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DS731_03315 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AYA63109
LinkDB
All DBs
Position
complement(750284..752434)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYEGKSLTVTLSDDGIAELVFDAQGSVNKFDRQTVAELDEATAAMAAHGGIKGAVVRSG
KPAFIVGADITEFTAMFEQPEEEVLAWVAKTSQVFDRFEDLPFPTIAAVNGFALGGGCEM
ALACDFRVVDTTASIGLPEVKLGLMPGFGGTVRLPRLIGSDNALEWMTTGKDRKGQQALD
EGAVDAVVAPEKLLDAATTMVSNAAAGKLDWKTRRANKKAPLKLNQNEAMMSFSTAQAFV
AAKAGKHYPAPHMMVETVKNAAGLDRDGALKLENQGFVKLAKTDAAQAQIGIFLADQLVK
GKGKKMAKAATKEVKLNAVLGAGIMGGGIAYQSASKGLPVVMKDINTPALDLGLSEAAKI
LNKGMERGKVDAKKMAATLNAITPTLEYSTLKDADVVIEAVVENPKVKGIVLKEVEGVVA
DDAIICSNTSTISINQLAENLDKPERFCGMHFFNPVHRMPLVEIIRGEKTTDDTINAVVA
TTLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLVLDGADFVAVDKVMEKDFGWPMGPAY
LLDVVGMDTADHAAGVMAEGIPERMAKLENDPVTLLYEAKRLGQKNGKGFYNFGTDKRGR
PSKEAAEEAYSLINANSAETKAFDKEEIIARLMIPMANEAIRCLEEGIVASAAEADMALL
YGLGFPPFRGGIFRYIETLGLEQFVALADKYAHLGPIYQISDGVRQMAAEGKSYFA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatatacgaaggcaagagtctgaccgttacgttgtcagatgatggtattgctgaactg
gtttttgatgcacaaggttcagtcaacaaatttgaccgccagacggtagctgaactggat
gaagccactgcggctatggctgctcatggtggcattaaaggtgcagtagtaagaagtggc
aaaccggctttcatcgtgggtgccgatatcaccgaatttacggctatgtttgagcaaccg
gaagaagaagtgcttgcgtgggtagctaaaacatcacaggtattcgatcgctttgaagat
cttcccttccccaccatcgcagcggtaaatggcttcgcgctgggcggtggctgtgagatg
gcactggcttgtgatttccgcgttgttgacactaccgcttctattggtctgccggaagtc
aaactgggcctgatgcccggctttggtggtaccgttcgcctcccccgcctgattgggtct
gataatgctctggaatggatgaccaccggcaaagacagaaaaggccagcaagcacttgat
gaaggtgcggtagacgcagtcgtggcaccggagaagcttcttgatgcagctaccacaatg
gtaagcaatgccgctgccggcaagctggactggaaaacccgccgtgcaaataaaaaagca
ccgttaaaactgaatcaaaatgaagcaatgatgagtttttccacggcgcaggcattcgtg
gcggccaaagcaggtaaacattatccggctccccacatgatggtagagaccgttaaaaat
gcagccggtctggatcgcgacggcgcgttgaaactggaaaaccagggctttgttaaactg
gctaaaaccgacgcggcacaagctcaaatcggtattttcctggctgaccagctggtaaaa
ggcaagggcaagaaaatggccaaagccgccaccaaagaagtcaaacttaatgcggttctc
ggcgccggcatcatgggtggtggaatcgcttatcagagcgcatccaaaggcttaccggta
gtgatgaaagatatcaacactccggcgcttgatttaggcttgagtgaagcagccaaaatt
ctgaataaaggcatggagcgcggcaaagtcgacgcgaagaaaatggcagccacgttaaat
gccattaccccgactctcgaatacagcacgctgaaagacgcagacgttgtcatcgaagcg
gttgtcgaaaatccgaaagtaaaaggcatcgtactgaaagaagtggaaggtgtggtggca
gatgacgccattatatgttcaaacacatccaccatttccattaaccagctggctgaaaac
ctcgacaaaccagagcgcttctgtggcatgcatttctttaatcctgtacatcgcatgccg
ctggttgagattatccgtggtgagaagaccactgacgacaccattaatgccgtagtcgct
accacgctgaaaatgggcaaaacccccatcgtggtcaatgattgccccggctttttagtg
aaccgtgtgttgttcccttactttgccggcttcagcaaactggtactcgacggtgccgat
ttcgttgcggttgataaggtcatggagaaagacttcggctggccaatggggcctgcatac
ctgctggacgtggtaggtatggatacggctgatcacgctgcgggcgttatggctgaaggt
attccggagcgcatggcgaaacttgagaatgatccggtcactttgctgtacgaagcgaaa
cgcctgggtcagaaaaacggcaaaggtttttataacttcggtactgacaaacggggacgt
cccagtaaagaagcagcagaagaggcttacagcctgatcaacgcaaatagtgctgaaacc
aaggcctttgataaagaagaaatcattgcccgcctgatgattcctatggcaaacgaggct
atccgttgtctggaagaaggcattgttgccagtgctgcagaagccgatatggcgctgctt
tacggactgggattccctcctttccgtggcggaattttccgttatatcgaaacactgggc
cttgagcagtttgttgctctggcagacaaatatgcccacttaggtccgatctatcagatt
tccgacggcgtgcgccagatggccgctgaaggtaaatcttatttcgcgtaa
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