Alteromonas sp. RKMC-009: DS731_06960
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Entry
DS731_06960 CDS
T05653
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
alr
Alteromonas sp. RKMC-009
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alr02000
]
DS731_06960
Transporters [BR:
alr02000
]
Other transporters
Pores ion channels [TC:
1
]
DS731_06960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AYA63762
LinkDB
All DBs
Position
1584418..1587252
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AA seq
944 aa
AA seq
DB search
MFENTRLAKSVKLACAFGAVTAASMTSNGAFAQEEATADGEKVEKIQVTGSRIRRTDIES
SSPVQITSDVEIKLSGFTRVEDLLNSLPQIEAGQTAFQANGASGTASVDLRGLGPSRTLV
LVNGRRLQPGGVYSQSADINQIPAGLVKRVEVLTGGASTTYGADAVAGVVNFVMDTDFEG
FEFTAGAQGYQHDNSNAYIQGLMDERDFEYPTGSSGIDGTSFNYDLAIGGSFDGGKGHAV
AYATYRRDNELRQEARDYSSCALNAAGTACGGSGNAEVPNFYIGGVADGAFDWDNSGYYT
LDTNSDFIDSVGNAYNYAPINHFMRPDERYSIGAFVNYEVNEHFNPYMETMFMRDVTRAQ
IAESGTFFAETYLIDYDSELINDSQRAFLTSELGITSGQQFATYIGKRNTEGGPRSSNLE
HNSLRMVVGTRGAINDMWEYDVSAQYGTTGSSAAYINDFYLENIAAALSPDCDGDCIPYE
VFTYQGITSEAASTLTGTAILNGETAETIVNGYVSGEFDYTLPTADAPIAAVFGAEYRKE
EFSRTSDTVFATGALAGQGGPTPSIYGSYSVKELFTELSVPVLESLTLDLGYRYSDYSTS
GGTDTYKIAGEFQVNDDWMIRANYNRAVRAPNVANLFTPQELGLWSGVDPCAGATPEYSE
AQCALTGVTAAQYGNVVASPASQYNDYTGGNPNLDPEVADTYGLGVVANPIENLNFSVDY
WLIEMEDVIGTVGSELTVRQCALTGSSTFCDNVVRSGSGSLWLGTEGYVSATNINLAGRT
WEGIDLDANYELEVGEGTITTRLIGTYFLTKEYDTIPGVTEAYDCSGEISTDCFAQPEWR
HTLTVSYTTGDFWSLQAKWRYYGEVNYSGTTDTLLADGISAQSYLDLKGTFDVNDHVGVL
IGVNNVLDKEPPLVGGSLSSNGNAVAGFYDTLGRFLHASVTVRY
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatacaagactggcgaagtcagtgaagcttgcttgtgccttcggtgcagta
actgctgcctcaatgaccagcaatggcgcattcgcgcaagaggaagccacggcagatggt
gaaaaagttgagaaaatccaggtaactggttctcgtattcgtcgtacagacatcgaatct
tccagcccggttcaaattacatcagacgttgaaatcaaactgtctggttttacccgtgtt
gaagaccttctgaacagcctgcctcaaatcgaagctggtcaaacagctttccaggctaac
ggcgcctcaggtactgcatctgttgaccttcgtggtcttggcccgagccgtactctggta
ctggtaaacggtcgtcgtctgcagccgggcggtgtttattctcagtctgctgacattaac
cagattcctgctggtctggttaagcgtgttgaagtactgactggtggtgcatcaaccact
tacggtgctgacgcagtagcgggtgttgttaactttgtaatggatactgacttcgaaggt
ttcgaattcactgccggtgcacaaggttaccagcacgacaactctaatgcctacatccag
ggtctgatggacgaacgtgacttcgaataccctacaggaagctctggtattgacggtacg
tcattcaactacgacctggcgatcggcggtagctttgacggtggtaaaggccacgcagtt
gcttacgcaacttaccgtcgtgataatgaattacgtcaggaagcccgtgattactcctca
tgtgctctgaacgctgctggtactgcctgtggtggttccggtaacgctgaagtacctaac
ttctacatcggtggcgtagctgacggtgcgtttgactgggataactcaggttattatacg
ctggacactaacagtgacttcattgattctgttggcaatgcttataactacgcgcctatc
aaccacttcatgcgtccggatgagcgttacagcatcggtgctttcgttaactatgaagtt
aatgagcactttaacccgtacatggaaaccatgttcatgcgcgacgtaacgcgtgcacag
atcgcggaatcaggtactttcttcgcagaaacttaccttatcgattacgacagtgagtta
attaatgattcacaacgtgctttcctgacatctgaactgggtattaccagtggtcaacag
tttgcgacttacatcggtaagcgtaacactgaaggtggtccacgttcttctaaccttgag
cacaactctttgcgcatggttgtgggtactcgtggtgcgatcaacgacatgtgggaatat
gatgtgtctgcacagtacggtactaccggttcttctgctgcatacatcaacgacttctac
ctggaaaacatcgctgcagcactgtctccggactgtgatggcgactgtatcccttacgaa
gtattcacttatcagggcatcacgtcagaagctgcaagcaccttaaccggtactgccatc
ctgaacggtgaaactgctgaaactatcgtgaacggttacgtaagcggtgagttcgactac
acactgcctactgctgatgcgccaatcgcggctgtattcggtgctgagtaccgtaaagaa
gagttctcacgtacttctgacaccgtattcgcaaccggtgcactggctggtcagggcggt
cctacgcctagcatctacggttcttacagcgttaaagagctgttcacagaattaagcgta
cctgttcttgagtcactgactttagacctgggttaccgttactctgactacagcacttca
ggcggtacagatacgtataaaatcgccggtgaattccaggtcaacgatgactggatgatc
cgtgctaactataaccgtgcggttcgtgcacctaacgttgcaaacctgtttactcctcag
gagctgggtctgtggtctggtgttgatccatgtgccggtgcaacgcctgaatacagcgaa
gcacagtgtgctctgactggtgttacagctgcgcagtacggtaacgttgttgcaagccct
gcgagccagtataacgattacactggtggtaaccctaaccttgaccctgaagttgctgat
acttacggcttaggtgtggttgctaacccaatcgaaaacctgaacttctctgttgattac
tggttaatcgaaatggaagacgttatcggtacagttggttctgagctgacagttcgtcag
tgtgctctgaccggtagctctactttctgtgataacgttgttcgttcaggttcaggctct
ctgtggttaggtactgaaggctatgtttctgcaactaacatcaaccttgccggccgtaca
tgggaaggtatcgacttagatgcgaactatgagctggaagtgggtgaaggcacaatcact
acccgcttaatcggtacatacttcctgaccaaggaatacgatacaattcctggcgtaact
gaagcgtatgactgttctggcgagatcagcactgactgttttgctcagcctgagtggcgt
cacactctgacagttagctacaccactggtgacttctggtctttacaggctaaatggcgt
tactacggtgaagttaactacagcggtactacagatacactgcttgcagacggcatttct
gcacaaagctaccttgacctgaaaggtacttttgatgtgaatgaccacgttggcgtattg
attggtgtgaacaacgttctggataaagagccgcctctggttggtggtagcttgtcttct
aacggtaacgcagttgctggtttctacgacacactgggtcgtttcctgcacgctagcgta
actgttcgctactaa
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