Alteromonas sp. RKMC-009: DS731_07570
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Entry
DS731_07570 CDS
T05653
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
alr
Alteromonas sp. RKMC-009
Pathway
alr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DS731_07570 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alr03400
]
DS731_07570 (uvrB)
DNA repair and recombination proteins [BR:
alr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DS731_07570 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DS731_07570 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
eIF3_p135
Kinesin
AAA_22
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
AYA63868
LinkDB
All DBs
Position
1704877..1706892
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AA seq
671 aa
AA seq
DB search
MSKGFELESKYQPAGDQPKAIEALVDGLESGLASQTLLGVTGSGKTFTMANIIKQVQRPT
LIMAHNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDHIE
QMRLSATKALMERRDVVIVASVSAIYGLGDPESYMKMLLHLRQGDTMDQRDILRRLAELQ
YKRNDLAFERGTFRVRGDVIDIFPADSEKQAVRVELFDSEIDKISLFDPLTGAVDKSVIR
ATVFPKTHYVTPREKILAAIEEIKVELKDRKAQLQESNKLLEDQRISQRTQFDIEMMLEL
GYCSGIENYSRYLSGRAPGEPPPTLLDYFPADGLMFIDESHVTVSQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPLKFEEFEQISPQTIYVSATPGEYELKKSDGEIVEQVVRPTGLLD
PEIEVRPVATQVDDVLSEIQKRVAVDERVLITTLTKRMAEDLSEYLNEHGVKVRYLHSDI
DTVERIEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRAERSLIQTIG
RAARHVNGRAIMYADVITKSMKKAIDETNRRREKQEAHNKANGVVPQRLNKPITDIMDLG
DSAHPASGKVKLRKVAEKKKEMQAASATELMAQIADLEKKMFEFARELEFEKAASVRDDI
ETLRKQVVAVS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaggtttcgaactggaatccaaatatcaaccggcaggggatcagccaaaagcc
atagaagctctggttgacgggctggaaagcggtcttgccagtcagacattgctgggggtt
accggctccggtaagaccttcaccatggcgaacattattaagcaggtgcagcgtccgaca
ttgattatggcgcacaataaaaccctggcggcccagctttatggtgaaatgaaagagttc
tttccgaacaatgcggtggaatatttcgtttcctattacgactattatcagcctgaagcg
tacgttcccagtaccgatacttttatagagaaagatgcgtcaatcaacgaccacattgaa
caaatgcggttgtcagcgacgaaggcactgatggagcggcgcgatgttgttatcgtggcc
agcgtgtctgccatttatggtttgggtgatcctgagtcctacatgaaaatgctgttgcat
ttgcgccagggcgacactatggatcagcgggatattctgcgccgtcttgccgaactgcaa
tataagcgtaatgacctggccttcgagcggggcacattccgtgtacggggagacgtgatt
gatatcttccctgcggattcagagaagcaggccgtgcgggtagaattgttcgacagtgag
attgataaaatcagcctgtttgacccgttgaccggtgcggtggataaatcggtgatccgt
gccacggtgtttcctaaaacccactatgtcacacccagagaaaaaattctggctgccatt
gaagagattaaagttgaactgaaagatcgcaaggcgcagctacaggagagtaataagtta
ctcgaagaccagcggatttcccagcgcacccagtttgatatcgaaatgatgctggagttg
ggctactgctccggcattgagaactactcacgctatctctccggcagagcgccgggtgag
ccgcccccgacactgctggactactttcctgctgacggcctgatgtttattgatgaatca
cacgttactgtgtcgcaaatcggggcgatgtacaaaggcgaccggtcgcggaaggaaacg
ctggtggaatacggcttccggttaccatcggcactggataaccggcctctgaagtttgag
gagttcgagcagatctctccccagacgatatatgtttccgcgacgccgggtgaatatgag
ctgaaaaaatctgacggcgaaattgtggagcaggtggtacgtcccactggcttgctcgac
ccggaaattgaagtacgtccggtggcgacgcaagtcgatgatgtactgtctgaaattcag
aaaagggttgccgtagacgagcgggtgttaattacaacgctgaccaagcgcatggccgaa
gatttaagcgaatatctgaatgaacatggcgtgaaagtgcgttatttgcattccgatatt
gataccgttgaacgtattgaaattatccgcgatctccgtctgggtaagttcgatgtgctg
gtgggcattaacctgctcagggaaggtctggatatgcctgaggtatcgctggttgcgatt
cttgatgcggataaagagggctttctccgcgctgagcgctcactgatccagaccattggc
cgtgcagcccgtcacgttaatggccgcgccatcatgtacgcagacgtgatcactaagtcg
atgaaaaaggccattgatgaaactaaccggcgcagggagaaacaggaagcccacaataag
gccaacggtgtagtccctcaacggttaaacaaacccattacggacattatggacttaggt
gacagtgcccatcctgcttccggcaaagtgaaactgcgtaaagttgccgagaagaaaaaa
gaaatgcaggctgccagtgccacggaacttatggcgcaaattgctgatcttgagaagaaa
atgtttgagtttgcccgtgagcttgaatttgaaaaagccgcgtcagtgcgtgatgacatc
gaaacattacgtaagcaggtcgtcgccgtgtcttaa
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