Alteromonas sp. RKMC-009: DS731_09185
Help
Entry
DS731_09185 CDS
T05653
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alr
Alteromonas sp. RKMC-009
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alr03016
]
DS731_09185 (truB)
Enzymes [BR:
alr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DS731_09185 (truB)
Transfer RNA biogenesis [BR:
alr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DS731_09185 (truB)
Prokaryotic type
DS731_09185 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
AYA64147
UniProt:
A0A385MUI6
LinkDB
All DBs
Position
2077009..2077986
Genome browser
AA seq
325 aa
AA seq
DB search
MGRRRKGRSINGVLLLNKPTGGSSNQILQKVRWCYKAAKAGHTGALDPLASGMLPICLGE
ATKFSQFLLDADKTYEVTMHLGVRTTTSDADGEVVEEKPVNVSEDEVRSACLAFLGQSKQ
IPSMFSALKHQGKPLYYYARQGITVEREARDITIFELEITRMALPDVDMRVRCSKGTYIR
SLVDDIGQQLGCGGYVTRLHRTEVADYPADKMVSLDDVIAMQEALDEGEFDTLDQLLLPM
DTAVLSLPEIMLDSQQYARFEHGQSVLPDSVATLVAGEQYRVYTRQDDEVLFLGVGEAVV
SPKDQPRADAGEVFVSPKRRVVYTD
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggcagacgtcgtaagggccgtagtatcaacggtgtattgctgttgaataagccaaca
ggcggttcatctaaccagattttacaaaaagtacgctggtgctataaagcggcgaaagcc
ggtcacaccggcgcgctggatccgctggccagcggcatgttacccatatgcctgggcgaa
gcgacaaagttttctcagtttctgttagatgctgataaaacttacgaagtcaccatgcac
ctgggcgtcagaacgaccacgtccgatgctgacggcgaagtcgtggaagaaaagccggta
aatgtttctgaggacgaagtccgcagtgcctgcctggcgtttcttggccagagtaagcaa
atcccttccatgttttcagcattgaagcaccagggaaagccgctttactactatgcgcgt
cagggcattacagtagaaagagaagcccgggatattaccattttcgaactggaaattacc
cgcatggcgttaccggatgtagacatgcgggtgcgttgcagcaaagggacttatatccgt
tcactggtggatgacatcggtcagcaattgggttgcggcggttacgttacccgcctccac
cgtacggaagtggctgattatcctgcagataaaatggtatctctggatgacgtgattgct
atgcaggaagcactggatgagggggagtttgacacccttgatcaactgctgttacccatg
gacacggctgttttatcattaccggaaatcatgctggactcacagcaatatgcccgtttt
gaacatggtcagagtgtactgcctgacagcgtggcaacacttgttgccggtgaacaatac
cgggtgtataccagacaagatgatgaagtactgtttctgggggtaggagaagccgtggta
tcgcccaaagaccagccccgtgcagatgccggtgaggtatttgtttcgccgaaacgcaga
gtcgtctacacagattga
DBGET
integrated database retrieval system
