Alteromonas sp. RKMC-009: DS731_10280
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Entry
DS731_10280 CDS
T05653
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alr
Alteromonas sp. RKMC-009
Pathway
alr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DS731_10280 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alr03019
]
DS731_10280 (pnp)
03016 Transfer RNA biogenesis [BR:
alr03016
]
DS731_10280 (pnp)
Enzymes [BR:
alr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DS731_10280 (pnp)
Messenger RNA biogenesis [BR:
alr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DS731_10280 (pnp)
Transfer RNA biogenesis [BR:
alr03016
]
Prokaryotic type
tRNA degradation factors
DS731_10280 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AYA64356
UniProt:
A0A385MV69
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All DBs
Position
2306185..2308305
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AA seq
706 aa
AA seq
DB search
MTPITHSFQYGQHTVTLETGVIARQATAAVIASMDDTSVMVTVVGKKEAKADQDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPEGFFNEVQVVVTVLSAN
PEIPTDIISLIGTSAALAISGIPFNGPVGAARVGYKDGEYILNTRFSEQPESQLDLVVAG
TESAVLMVESEASVLSEDVMLGAVMFGHEQSQAVVEAVKSFAAEVNTPAWDWAPKAENTE
LKAKVKELAESGMTAAYQISDKLERKDAVTKVTEEALAKILEENPEQDAKEASDLLHDLE
SDVVRSRILAGEPRIDGRDPAMVRALDVATGVLPRTHGSAVFTRGETQALVVATLGTERD
AQMIDELQGKRDSKFMLHYNFPPYCVGETGMIGSPKRREIGHGRLAKRGIQAVMPSDEEF
PYVVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKSDENFVVLSDI
LGDEDHLGDMDFKVAGTTEGITALQMDIKIEGITKEIMQIALKQAKEARLHILSVMDKAI
TGHREELSEFAPRIYTMKIDQDKIRDVIGKGGAMIRSITEASDTNIEIEDDGTIKIFATE
RAKADIAIGMIEGVTAEIEVGKTYNGKITRIVDFGAFVEVLPGKEGLVHISQIAHERVNK
VTDYLKEGEMVDVKVMEIDRQNRVRLSIKELLEKPAPAEAKEDKGE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctattactcattcttttcagtatggtcagcatactgtaactttggaaactggc
gttatcgcacgtcaggcaactgcagccgtcatcgccagcatggacgatacctctgtgatg
gtaactgtagttggtaaaaaagaagcgaaagccgatcaggatttcttcccgttaacggtt
aactatcaggaaaaagcttacgctgccggtaaaatcccaggtggctttttcaagcgtgaa
ggccgtccttcagaaggcgaaacactgacagcccgtctgattgaccgtccaatccgtcca
ctgttcccggaaggttttttcaatgaagtacaggttgttgttaccgtactttctgcgaac
cctgaaatcccgactgacatcatttcactgattggtacgtctgcggcactggctatctcc
ggtattccattcaacggtcctgttggtgcagcccgtgtaggttacaaagatggcgagtac
atcctgaatacacgtttctctgagcagcctgaaagccagcttgacctggtggttgccggt
actgaaagtgcggttctgatggttgaatctgaagccagcgtactgtctgaagacgtgatg
ctgggtgcggtaatgttcggtcacgaacagtcgcaagcagttgtggaagcggttaagtct
ttcgctgctgaagtaaatactccggcatgggactgggcgcctaaagctgaaaacaccgaa
ctgaaagcgaaagtaaaagaactggctgaaagcggcatgactgcggcttaccagatctct
gacaagcttgagcgtaaagacgcagtaacaaaagttactgaagaagcgctggcaaaaatt
ctggaagaaaatccagagcaagatgctaaagaagcttctgatctgctgcacgacctggaa
agtgacgtagtacgttcacgcatcctggctggtgagccacgtattgacggtcgtgatcct
gccatggttcgtgctcttgacgttgcgactggcgtattgccacgtactcacggttctgct
gttttcacccgtggtgagactcaggctctggttgttgccactctgggtacagaacgtgac
gcacagatgattgatgaactgcagggcaagcgtgacagcaagttcatgctgcactacaac
ttccctccatactgtgtgggtgaaaccggtatgatcggttcgcctaagcgtcgtgaaatc
ggccacggtcgtctggcgaaacgtggtattcaggcggttatgccttctgatgaagaattc
ccgtatgtagtgcgtgtggtttctgaaatcactgaatctaacggttcatcttctatggcg
tctgtatgtggtacttctctggcgctgatggatgccggtgtaccaattaaagcgtctgtt
gcgggtattgcaatgggactggttaagagcgacgaaaacttcgtggttctgtctgacatt
ctgggtgacgaagatcatctgggtgacatggactttaaagtagccggtactaccgaaggt
atcactgcactgcagatggatattaagatcgaaggtatcaccaaagaaattatgcagatt
gcacttaaacaggcaaaagaagcccgtttacacattctgagcgtaatggataaggcgatc
accggtcaccgtgaagagctgagcgaatttgctccacgcatctacaccatgaagattgat
caggacaagatccgtgacgtaatcggtaaaggtggcgcgatgattcgctctatcactgaa
gcgtctgataccaacatcgaaatcgaagatgacggtactatcaagatcttcgccactgag
cgtgctaaagcagatatcgcgatcggcatgattgaaggcgtaacggctgaaatcgaagta
ggcaaaacctacaacggtaagatcacccgtatcgtagacttcggtgcattcgtagaagta
ctgcctggtaaggaaggtctggttcacatttcacaaatcgctcacgagcgtgtgaacaaa
gtgaccgactacctgaaagaaggcgaaatggttgacgtgaaagtcatggaaattgaccgt
cagaaccgtgtacgtctgagcatcaaagagctgcttgaaaagccggctcctgcagaagct
aaagaagataaaggcgaataa
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