Alteromonas sp. RKMC-009: DS731_11420
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Entry
DS731_11420 CDS
T05653
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
alr
Alteromonas sp. RKMC-009
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alr03032
]
DS731_11420 (gyrA)
03400 DNA repair and recombination proteins [BR:
alr03400
]
DS731_11420 (gyrA)
Enzymes [BR:
alr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DS731_11420 (gyrA)
DNA replication proteins [BR:
alr03032
]
Prokaryotic type
DNA Topoisomerases
DS731_11420 (gyrA)
DNA repair and recombination proteins [BR:
alr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DS731_11420 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HET-s_218-289
PLC-beta_C
Ins134_P3_kin_N
Motif
Other DBs
NCBI-ProteinID:
AYA64565
UniProt:
A0A385MV40
LinkDB
All DBs
Position
complement(2564988..2567681)
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AA seq
897 aa
AA seq
DB search
MTDNAKEILPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDFN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDFVPNYDGTEQIPEVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCIAMIENPAVTVEELMQYIPGPDFPTAAMISGRKGIDDAYRTGRGKI
YLRAKAEIETDSNGKETIIVNEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDGM
RIVVEVKRNESAEVLLNHLYANTQLQTVFGINMVALDNGQPKVFNLKEMLEAFILHRREV
VTRRTVYELRKARDRAHILEGLAIALTNIDPIIELIKASPSPSEAKKALVAQGWNLGDVA
DMLERAGDDAARPDWLTPEFGIRDGKYYLTEQQAQAILDLRLHKLTGLEHEKILDEYKEL
LAIIAELLHILRSPERLMEVIREELEKVRDEFGDERRTEITAASHDIDIEDLIEQEDVVV
TLSREGYVKYQKLTEYEAQRRGGKGKSATKMKDEDFIERLLVANTHDHILCFSTRGRLYW
LKVYQLPFASRNARGKPIVNILPLENDERITAILPIKEFEEGKFVLMATANGTVKKTDLS
LYSRPRSSGIIAVNLNEGDELIGVSITHGDDDIMLFSDEGKVVRFNEKLRDSETGEVKRD
PETGEELQALRPMGRTATGVRGIKLQEGQRVVSLIVPRGDGAILTATENGYGKRTPLEDY
PAKSRATQGVVSIKVSERNGKVVGAVQVDETDEIMLISNMGTLVRTRVGEVSTVGRNTQG
VRLIRTADDEKVVGLQRIEEVIDEELELEEGGENTAEEVSANNDAAVSDSDKPTTEE
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgactgataacgctaaagaaattctccccataaatatcgaggaagagcttaaaaactcc
taccttgattatgcgatgagcgttattgtcgggcgcgcattgcctgacgtaagggacggc
ctcaagccggttcaccgccgcgtactcttcgcgatgaacgaactcaaaaacgacttcaat
aaaccgtataagaaatcggcccgtgtggtgggtgatgttatcggtaaatatcaccctcat
ggtgacagtgcggtatacgacaccatcgtacgtatggcacagccattctctttgcgctac
atgctggtagacgggcagggtaacttcggttctgtagacggcgactctgccgcggccatg
cgttataccgaagtacgtatggcaaaaattgcccatgagttactggcggatcttgataaa
gaaaccgtagattttgtacctaactatgacggtacagagcaaatccctgaggttctacct
actaaggtgccgaacctgctggtaaacggctcttccggtattgccgttggtatggcaaca
aacattccgccccacaacctcactgaagtggttaacggctgtatcgcaatgatagagaat
cctgccgttaccgttgaagagctgatgcagtatattccgggtccggatttccctactgcg
gcgatgatcagtggacgtaagggtattgatgatgcttaccgtaccggtcgtggcaaaatc
tatctgcgtgccaaggcggaaatcgaaactgacagtaatggtaaagaaaccattattgtt
aacgagatcccttatcaggtaaacaaagcccgcctgattgaaaagatcgctgaactggta
aaagaaaaacgtatcgaaggtatttctgccctgcgtgatgagtctgacaaagacggtatg
cgcattgttgttgaagtaaaacgcaacgagtcggcggaagtactgcttaaccacctgtat
gccaatacccagctacaaacagtattcggtattaatatggtggcactggataacggtcag
cctaaagtatttaacctcaaggaaatgctagaggcgtttatccttcaccgtcgtgaagtg
gttacccgccgtacggtatacgaactgcgtaaagcgcgggaccgtgcccatatccttgaa
ggtcttgccattgcactgaccaacatcgatcctatcattgagcttattaaagcttcgccg
agtccttctgaagctaagaaagctttggttgctcagggctggaacctgggtgatgttgct
gacatgcttgagcgtgccggtgatgatgcagcccgtccggactggctgacgccggaattt
ggtatccgtgacggcaagtactacctgacagaacaacaggcacaggccatccttgatctg
cgtcttcataaactgacaggtcttgagcacgaaaagatccttgatgagtacaaagagcta
ctggccatcatcgctgagttactgcacattctgcgtagccctgagcgtctgatggaagtg
attcgcgaagagctcgaaaaagtgcgtgatgaatttggtgatgaacgtcgcacagaaatc
acggctgcaagtcatgacattgatattgaagatttgattgagcaggaagacgttgttgtg
acgctgtcccgcgaaggctatgtgaaatatcagaaactgactgaatatgaagcacagcgc
cgtggtggtaaaggtaagtcagcgacgaagatgaaagatgaagatttcattgagcgtctg
ctggttgcgaatacccatgaccacatcctgtgtttctctacccgtggccgtctgtactgg
ttgaaggtttatcagttaccatttgccagccggaacgcccgtggtaaacctattgtgaat
attctgccgctggaaaatgatgagcggatcactgccattctacctatcaaagaatttgaa
gaaggcaagtttgtactcatggcgacagccaacggtacggtgaaaaagactgatttgagt
ctgtactccagaccgcgctccagtggtattattgccgtcaaccttaatgaaggcgatgaa
ctgattggcgtatcaatcacccacggtgatgacgacatcatgctgttctctgacgaaggt
aaagtggttcgttttaacgaaaaactgcgcgactcagaaacaggtgaagtgaaacgtgat
ccggaaaccggcgaagagttgcaggctctgcgtcctatgggcagaacagcaacgggtgtt
cgcggtattaaactgcaggaaggtcagcgtgtagtatctctgattgttccccgtggtgac
ggcgccatccttactgcgactgaaaatggttatggtaaacgtacgccgcttgaagattac
ccggctaagagtcgtgcgactcagggcgtggtgtctatcaaagtgtcagaacgtaacggt
aaagttgtcggcgctgtacaggttgatgaaaccgatgaaatcatgcttatcagcaacatg
ggcacacttgtacgtacccgtgtcggtgaagtgtctacggttggccgtaacacccagggt
gtacgtcttatcagaactgctgatgatgagaaagtagtaggtcttcaacgtatcgaagaa
gtgatcgacgaagaacttgaactggaagaaggcggggaaaacaccgctgaagaagtatct
gctaacaatgatgccgctgtctcagacagcgataagccaacgacagaagaataa
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