Alteromonas sp. RKMC-009: DS731_13970
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Entry
DS731_13970 CDS
T05653
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
alr
Alteromonas sp. RKMC-009
Pathway
alr03030
DNA replication
alr03430
Mismatch repair
alr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DS731_13970
03430 Mismatch repair
DS731_13970
03440 Homologous recombination
DS731_13970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alr03032
]
DS731_13970
03400 DNA repair and recombination proteins [BR:
alr03400
]
DS731_13970
Enzymes [BR:
alr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DS731_13970
DNA replication proteins [BR:
alr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DS731_13970
DNA repair and recombination proteins [BR:
alr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DS731_13970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
RuvB_N
AAA_14
AAA_22
AAA_2
AAA_18
AAA_16
AAA_5
Rad17
AAA_19
AAA_30
AAA_assoc_2
nSTAND3
PIF1
ABC_tran
TniB
Motif
Other DBs
NCBI-ProteinID:
AYA65035
LinkDB
All DBs
Position
complement(3122231..3124867)
Genome browser
AA seq
878 aa
AA seq
DB search
MSYQVLARKWRPRKFSELVGQEHVVTAIANALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEEGQGANPCGVCDTCREIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSR
EQISGQLTHILQQESIPFEAPALALLARAAQGSMRDALSLTDQAIAQGDNQVAAAIVTDM
LGLMDRHQILKLLFALVKKDAPGLLDIVASMAEQAPDFGQVLAELSSLLHQIALTQWVPE
TCKLETTSAKAIYQLAKALPAEQVQLFYQIALQGRKDLPHAADGRSALEMTLLRMMSFAP
VPSGDDNLELIVDAQGSTETPVSQASAQPVSSAPSVASAPDTQAAPVLQPAQEKETAEPE
AAHAPQPAVHKIVTEGTGTTTGPADTDTSEDLHALNAEQAEIEKAAAEYRQPASERVPAE
PPVVEPEPVKDEPVLPESSRLLESGQQAEPSAQNGPPQWDDIPPADYDDMPPAAYEDEHY
EVPAEHAAPGHQSNNVTQAGSTDSLTSIEEMLALRQQLKTGRKEAAEAPAKKSENQSDTS
ERVRKLSQRGITSAPPVADNEPAETAASAPSEDDASSPPWENHSTTMAPETDDFADNGQS
EVGDAAASQPSSGQEAFAQEIEVQADAGVASFVEEDDYTGNVTPQQNENEAQGYQQTDVP
SDNAVATAPINRVQSVDSDALPAYLPDGSKLLLGRQIDSWSERVAELGLAGLTKQIVLNA
AFSIKDQDVTLELDESQSHLINDNAVAQLNEALSKALEHPVNVNIVYGQPAQTPLTLQAR
IDEMRRAYAHQVVSNDEKFTTLRDLFAATVLEDTVQPR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctggcaaggaagtggcgaccacgaaagtttagtgaactcgttggt
caggaacatgttgttaccgccatcgccaatgcattagataacgaccgcttacatcacgct
tatttatttaccggtacccgtggggtcggtaaaaccacaatcgcacgtatcttttcaaag
agtttaaactgcgaagaaggtcagggcgctaatccatgtggtgtttgtgatacctgtcgt
gaaatcgagcagggcaattacgtcgacctgctcgaaatcgatgcggcgtcacgtaccaaa
gtggaagatacccgcgaactgctggataacgtgcagtacaagcccacccgtggccgctac
aaagtgtacctcatcgatgaagtacacatgctgtctaagcacagttttaatgcgctgtta
aaaacccttgaagagccaccacctcatgtgaagtttctgctggcaaccactgatccgcag
aagctgcccattacaattctgtcgcgctgcctgcaatttaatttaaaagcgctgtcccgt
gagcaaatttcagggcaactgacacacatactgcagcaggaatccattccttttgaggca
ccggcactggcgttactggcccgtgcagcccagggcagtatgcgggatgcgctcagtctg
actgatcaggctattgcacagggcgataatcaggtagcggctgccatcgtcaccgacatg
ctcggtttgatggacagacatcaaattctgaagctgcttttcgcactggtgaaaaaggac
gctccgggtctgcttgatattgtggcatcaatggctgagcaagcgccggatttcggtcag
gtactggctgaactgtccagtttgttacaccagatagctttaacccagtgggtgcctgaa
acctgcaaactggaaacgacatctgccaaagcgatatatcaattggcaaaagcattaccg
gcagagcaggtgcagctgttttatcagattgctttgcaaggcagaaaagatttgccccat
gctgcagatggtcgctcagcgctggaaatgacactgttacgaatgatgtcttttgcaccg
gttccgtccggtgacgacaaccttgagttgatcgtggatgcgcagggcagtacagaaacg
ccggtgtcgcaagcgtctgcacaacctgtttcttctgctccgtctgtagcctcagcgcca
gatacgcaagctgcaccggttcttcagccggcgcaagaaaaagaaacggcggaacccgaa
gccgctcatgcccctcaaccggcggtgcacaaaattgttactgaaggtaccggaacaact
accgggccggcagatacagatacttcagaagatttacatgcgctcaatgctgaacaggct
gaaattgaaaaagcagcggcggaatatcgccagcctgcttctgagcgtgtgcccgctgaa
ccgcctgttgttgagccggagcctgtaaaagatgaacctgtactgccggaatcttcgcga
ctgcttgaatccgggcaacaggctgagccttcagcacagaatggtccgcctcagtgggat
gatattcctcctgcggactatgatgatatgccgcctgctgcttacgaagatgagcattat
gaagtaccggcagaacacgccgcgcccgggcatcagtcaaacaatgtgactcaggccggt
agtaccgattcattgacgtctatcgaagaaatgttagccctgcgccagcaattaaaaact
ggacgtaaggaggctgcagaagcacccgcaaaaaagtctgagaaccagagtgacaccagt
gagcgtgtccgcaagctgagtcaacggggtataacgtcagccccgcctgtggcagacaat
gaacctgctgaaacggcggcatctgcaccgtcagaggatgatgcctcgtcgccgccctgg
gaaaaccattcaactacgatggcccctgaaactgacgactttgctgataatggtcagtct
gaagttggtgatgctgcggcttcacaaccttcatccgggcaggaggcatttgctcaggaa
attgaagtacaggctgatgccggagtggcttcttttgttgaggaagatgactataccggc
aatgttaccccgcaacagaatgaaaatgaggctcaaggctatcaacaaactgacgtgcct
tctgataatgccgttgccactgcacctataaatcgtgttcaaagtgtcgatagcgatgct
ttaccagcttatttacctgatggctcaaaattattactcggccgtcagatagatagctgg
agcgaacgggttgcagaactgggactggccggtttaactaaacaaatcgtattaaatgct
gctttttcgataaaagatcaggatgtgacgcttgaattagatgagagtcagagccatctc
ataaatgacaatgctgttgcacaactgaatgaggcgttatctaaggcgctggagcatccg
gtcaatgtgaacattgtttacggacagccagcacaaacaccgctgacgttgcaggcacgt
atcgatgaaatgcgtcgtgcttatgcacatcaggtggttagcaacgatgaaaaatttacg
acattacgggatctttttgctgcaacagtgctcgaagacactgttcagccccggtaa
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