Alteromonas sp. RKMC-009: DS731_14455
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Entry
DS731_14455 CDS
T05653
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
alr
Alteromonas sp. RKMC-009
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alr03032
]
DS731_14455 (hupB)
03036 Chromosome and associated proteins [BR:
alr03036
]
DS731_14455 (hupB)
03400 DNA repair and recombination proteins [BR:
alr03400
]
DS731_14455 (hupB)
DNA replication proteins [BR:
alr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DS731_14455 (hupB)
Chromosome and associated proteins [BR:
alr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DS731_14455 (hupB)
DNA repair and recombination proteins [BR:
alr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DS731_14455 (hupB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
Barstar
Motif
Other DBs
NCBI-ProteinID:
AYA65121
UniProt:
A0A385MWX5
LinkDB
All DBs
Position
complement(3224031..3224303)
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AA seq
90 aa
AA seq
DB search
MNKSQLIDQIAAGADISKAAAGRALDAFTDAVTAALKEGDQVALVGFGTFAVRERSARSG
RNPQTGETIQIAAAKVPSFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctcaactcatcgaccaaatcgctgctggtgcagatatctctaaagctgct
gcaggccgtgcattagatgcattcactgatgcagttaccgcagcgcttaaagaaggtgat
caggttgcactggtaggtttcggtacgtttgcggttcgcgaacgctcagcgcgtagtggc
cgtaacccacaaactggtgagactattcaaatcgcagctgctaaagttccttctttcaaa
gctggtaaagctctgaaagacgcttgtaactaa
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