KEGG   Alteromonas sp. RKMC-009: DS731_14455
Entry
DS731_14455       CDS       T05653                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
alr  Alteromonas sp. RKMC-009
Brite
KEGG Orthology (KO) [BR:alr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:alr03032]
    DS731_14455 (hupB)
   03036 Chromosome and associated proteins [BR:alr03036]
    DS731_14455 (hupB)
   03400 DNA repair and recombination proteins [BR:alr03400]
    DS731_14455 (hupB)
DNA replication proteins [BR:alr03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DS731_14455 (hupB)
Chromosome and associated proteins [BR:alr03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DS731_14455 (hupB)
DNA repair and recombination proteins [BR:alr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DS731_14455 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg HU-CCDC81_euk_2 Barstar
Other DBs
NCBI-ProteinID: AYA65121
UniProt: A0A385MWX5
LinkDB
Position
complement(3224031..3224303)
AA seq 90 aa
MNKSQLIDQIAAGADISKAAAGRALDAFTDAVTAALKEGDQVALVGFGTFAVRERSARSG
RNPQTGETIQIAAAKVPSFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtctcaactcatcgaccaaatcgctgctggtgcagatatctctaaagctgct
gcaggccgtgcattagatgcattcactgatgcagttaccgcagcgcttaaagaaggtgat
caggttgcactggtaggtttcggtacgtttgcggttcgcgaacgctcagcgcgtagtggc
cgtaacccacaaactggtgagactattcaaatcgcagctgctaaagttccttctttcaaa
gctggtaaagctctgaaagacgcttgtaactaa

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