Alteromonas sp. RKMC-009: DS731_15720
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Entry
DS731_15720 CDS
T05653
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
alr
Alteromonas sp. RKMC-009
Pathway
alr02024
Quorum sensing
alr03060
Protein export
alr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
DS731_15720 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DS731_15720 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DS731_15720 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
alr02044
]
DS731_15720 (secD)
Secretion system [BR:
alr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
DS731_15720 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
Sterol-sensing
DUF5463
Motif
Other DBs
NCBI-ProteinID:
AYA65349
LinkDB
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Position
complement(3517872..3520406)
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AA seq
844 aa
AA seq
DB search
MKPFSARGVMTALVIVLGLLSAMPNILPPSWQQQLPGWYTQNQLSLGLDLQGGSHLLLAA
DTQPLFDKAFTGMKESLTKDLREAGIRYQVLSASDNTLRLSLSGGGGQFQQARELAFAYR
TTGQGEPQFTIEQNDNLLTVSLSESFKESLVSDALERSVEVVRRRLDETGLVDPGISRQG
NDGVLVQMPGVTDPSRIRELLGTTAQMEFHWVVTDSSRGSTVIMQDMDGQQQYRLEKRVA
MEGEHITDARLAFDPDTGNPVVTFKLDSTGGNIFAAMTRTHIGEPLAVVLDGKVITAPVI
RAVIGASGGQISGNFTPDEAKDLALMLRAGALPVPLTVIEERTVGPDLGSDAIKMGLSTG
LAGAALVLVFMTALYRRWGAIACVSLMINMGLLFGVLSLFRATLTLPGIAGIILTLGMAV
DANILINERIKEESLKGRVAGAAIRAGFDKAWSTILDSSLTTLIAVSLLFMFGSGPVKGF
AITIGIGLFTSMFTAIAVTRLLMLFAIRRRERDVLHFPGFRWLSQTDKKPLNFLKGRVAG
LITSAVLSVASVVLFFSPGLHYGVDFTGGTLVEVKSHHVQVEQLRNALTDGNIEGASIQE
FGKEGDYLIRVPQVTADTPVEQAALQSQQVELVKSAVTTLDDQAIFPRVDMVGAKVSGGF
ADASVLAVLIAGGGILLYLWLRFESHFALAATATIALDLTKTIGFFALTGLEFNLTAVAA
LLALIGYSINDKVVVFDRIREGFRATPDKPIIEVLNRSISATLSRTLFTSMTTFLALLPM
GLAGGASVASFALPMLFGIVIGTSSSIFIASPILYYLGKRREKKGLKQLRPTAEEVRESL
AHIP
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattttctgcacggggcgtgatgaccgcactcgtgattgtgctcggccttttg
agcgcaatgcccaatattttaccgccgtcatggcaacaacaattacccggctggtatacc
caaaaccagttgtctttaggccttgatttacagggcggttcccatttattgctggccgct
gatactcagccactgtttgataaagcctttaccggcatgaaagaaagtctcactaaggat
ttgcgggaggcggggatccgctatcaggtactgtctgcttccgacaataccctgcgctta
tccttatcaggaggcggcgggcaatttcagcaggcccgtgagctcgcctttgcttaccgc
acaacggggcagggcgagccgcagttcaccattgagcaaaacgataacttgctcactgtc
agtttgtcagagtcgtttaaggagagcctggtcagtgatgcgctggagcgcagcgtggaa
gtggtgcgccgccgtctcgatgagaccggactggtcgaccccggtatttcacggcagggt
aacgatggcgtgctggtacagatgccgggcgttacagacccgtcacgtatcagggagctc
cttggaacaaccgcacaaatggaatttcactgggtagtcacggatagcagtcgtggcagt
accgtgataatgcaggatatggatggccagcaacaataccgtctggaaaagcgggttgcg
atggaaggtgagcatattactgatgcaaggcttgctttcgatcctgacacaggaaacccg
gtggtgactttcaagctcgacagtaccggcggcaatatttttgcagctatgacccgcacg
catatcggtgagccgctggcagtcgttctggacggcaaagtgatcaccgcaccggtaata
cgggcagtaattggtgcatcgggcggccagatcagtggtaattttacaccggatgaagct
aaagatctggcactgatgttacgtgccggtgcgctgcctgtgcccctgactgtgattgaa
gagcggacggttggtcctgatctcggtagtgatgctatcaagatgggtctgagtacagga
cttgccggtgcagcgctggttctggtgtttatgacggcactttaccggcgctggggggcg
atcgcctgcgtaagcctgatgattaacatggggctgctttttggcgtgctgagtttattc
agggccacacttacgttacccggaattgccggcattattcttactctgggtatggcggta
gatgccaatattctgataaacgaacgtatcaaagaagagtctttgaaagggcgtgtcgcc
ggggcggcaatccgcgccggttttgacaaagcctggtcaaccatcctggattcaagcctg
acgaccctgattgccgtgagtctgctatttatgtttggcagcgggccggtaaaaggtttt
gcgattactatcggaattggcctgttcacgtccatgttcacggccattgcggtaacccgc
ctgttaatgttgtttgctatcagacgccgtgaaagagatgtgctccatttcccgggattc
cgctggctgtcgcagacagataagaagccgctgaacttcctgaaaggccgggtggcaggc
ttaatcacgtctgctgtcttgtcggtggcttccgtggtgctgtttttcagcccgggatta
cattacggcgttgatttcaccggtggtacactggtggaagtgaaaagccatcacgtgcag
gtggaacagctgcgaaatgctctgacagacggcaacattgaaggcgccagcattcaagag
tttggcaaagaaggtgattatcttatccgcgttcctcaggtaactgcggacacgccggtt
gaacaggctgcattgcaaagtcagcaggttgaactggtgaaatctgcagtaaccacactg
gatgaccaggcaatcttcccccgtgtggacatggttggtgcgaaggtcagcggcggtttt
gctgatgcttctgtgcttgctgtgctgattgccggagggggtattctgctgtatttgtgg
ttgcggtttgaatcgcattttgcactggcagcaacggcgacgattgcgcttgatctgaca
aagaccatcggtttctttgcgctcaccgggctggaattcaacctgacagcagtggcagca
ttgctggccctcatcggctattctattaatgataaggtcgtggtgtttgaccgtatacgg
gaaggattcagggcaacaccggataagcccattattgaagtgcttaaccgcagtatttct
gcgaccttgtccagaacactgtttacttcaatgaccacatttctggctttattgcctatg
gggctggccggcggggcgtctgtcgcgagttttgcgctacccatgctttttggcatcgta
attggtaccagttcctctatttttatagcatcgcctattttgtattaccttggaaagcgg
cgtgaaaagaaagggttaaagcaactgcgccccaccgcagaggaggtgagagaatcactg
gcgcacataccctga
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