Alteromonas sp. RKMC-009: DS731_16945
Help
Entry
DS731_16945 CDS
T05653
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
alr
Alteromonas sp. RKMC-009
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alr02000
]
DS731_16945
Transporters [BR:
alr02000
]
Other transporters
Pores ion channels [TC:
1
]
DS731_16945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AYA65571
LinkDB
All DBs
Position
complement(3817362..3820130)
Genome browser
AA seq
922 aa
AA seq
DB search
MLNLSGGKSMFVNRLATYSSMIALMGSLSCASAFAQENVQATSEQAAQSNAAEEEPEVIV
VTSTGTSIRGAAPVGSSLIEVGRDDIDRSATINTMNLLRETPQIFSLGVNDTSRSGSGGA
GNIVYGNAINIRGIGPYATLTLINGRRAVPQGTLGATVDPSSIPTIGLKRIEVIADGASA
VYGSDAVAGVANLILRRGFEGVQVEGQYGVGADYDEHQLSLITGKAWNTGQVTVSAQRSY
RSNIFGGDRDYYRADLTGMGGADYRVTSCNPGNIYLNGNSYAIPQGGATADNLVEGTQNT
CDNLSSTTDLMPEQTIHSAVMTLNQDLSDRVTMFVDALVYQRDGKRYSEPYDARISVPET
NAYFVSPAGITLEPCSGSLGLPAGTGCESIDYSFAEAYGSPAVTTFDTQTWQLTAGLDIT
LPADWLLNVHATMGQNDDQAFNRGGNVNSGALQAALASPDPSTAFNPFGTSENNQAVIDS
IFNYAIDTVAQTKVKDFGMKVDGPLMSLPGGDVKLAAGLGYYEMELWTGQVRGADGAREY
NFDPRSRDITSGFAELYIPIIGDDNAVPGIYSLVLDIAGRIDDYSDVGRTENPKIGIDWQ
PVEDVAIHASYGESFRAPLLTQLVSAGGSNLYIQNYFDPTINQTIRGATLSGGNDELVPE
TAETWSVGVDYTPSSYKGARFSINLFDVTYEGQIGGQLSNLNILRQEDVFSSIILRGAAA
QARTAELLAGGINVRSGSVAEAENTMVFVDGRNNNLGSTEARGLDFSMSVPMETDSGDFK
FGLLGTWFDYYRVAQTATAESIDQVNNLDYPVSLRMRGSINWQRDYWDLTLFANYTNSYN
NTLTGEEISSLTTLDFAASYIFSGGLSGIGEDLKVGLFINNITDEDPPYADIAPSNNGGG
GFDPQVGSPVGRLISLSLSKSF
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatttgtcaggaggcaagtcaatgtttgttaaccgtttagccacgtattcttca
atgatcgcgttaatgggatcactaagttgtgcatctgcattcgcacaggagaatgttcag
gccacatcagaacaagctgctcaaagcaatgcagccgaagaagaacccgaagtcattgtc
gtgacatctaccggaaccagtatccgcggtgctgcaccggtaggttcttcacttatcgaa
gtcgggcgtgatgatatcgatcgttctgctaccatcaataccatgaacctgctgcgtgaa
acgccgcagatattcagtttgggggtcaatgatacatcccgcagcggtagcggtggtgca
ggtaatatcgtgtacgggaatgccatcaacattcgtggtattggcccttacgccacactc
actctaatcaatgggcgacgtgctgtgccccagggcaccctcggtgccaccgttgatcct
tcgtcaattccgaccattggtttaaagcgtatagaagttattgcagatggtgcttcggcc
gtttacggctcagatgcggttgctggtgtggctaacctgatattacgtcgtgggtttgaa
ggtgtgcaggttgaggggcagtatggtgtgggagctgactacgatgaacaccaactgagt
ctgatcaccggtaaggcctggaataccgggcaggtaaccgtatctgcgcagcgctcttat
cgcagcaatatttttggcggcgaccgtgattattaccgtgctgacttaaccggcatgggc
ggtgctgattatcgggttaccagctgtaatccgggtaacatctacctcaacggaaacagt
tatgctattcctcagggcggtgcgacggctgacaatctggtagaggggacacagaatacc
tgtgataacttatcttcaacaacggatttaatgcccgagcaaaccatccatagtgccgtt
atgacgctgaatcaggatcttagtgatcgcgttacgatgttcgttgatgcactggtttat
caacgtgatggcaaacgctactccgaaccttacgatgcgcgaatttcggtaccggaaaca
aatgcatactttgtttctcctgcggggataacgcttgagccttgttcaggcagtctgggc
ctgcctgcaggtacaggttgtgaaagtatcgattatagttttgctgaggcttatggctct
ccggcggtcacgacatttgatacgcaaacctggcaactgacggccggtctcgacatcacc
ttaccggcagactggttgctcaatgtacatgccaccatggggcagaatgatgatcaggcg
tttaatcgtggcggtaatgtaaatagtggtgctctccaggcggccctggccagcccggat
ccttcgacagcattcaatccatttggcacatctgaaaacaatcaggcagtcatcgacagc
atttttaactacgctatcgacaccgttgcacaaaccaaagtgaaagattttggtatgaag
gtagacggtccgctcatgtcgctgccaggtggagacgtgaagctggcagctggcctgggc
tactacgaaatggaactatggactggtcaggtccgtggtgctgacggcgcccgtgaatac
aattttgaccccagaagccgtgacatcacatcaggttttgcagagttatatattccaatt
atcggtgatgataatgcagtgcccggaatttacagcctggtgctggacatcgctggtcgt
attgatgattacagtgatgttggcagaactgaaaaccccaagattggtatcgactggcag
ccggtggaagatgtggcaatacatgcaagctatggcgaatcattccgtgctccgctatta
acacagttagtcagcgctggcggcagtaatctttatatccagaactactttgatccgacg
atcaatcagactatccggggggccacgctctcaggggggaacgacgaactggtgccggaa
acagcagaaacctggtcagtgggtgttgattacacgccatcaagttacaaaggtgcccgt
ttttcaattaacctgttcgatgtcacttatgaaggacaaattggcgggcagttatcgaat
ctgaatattctgcgtcaggaagatgtgttttcttccatcattctgcggggcgctgcagca
caggcaagaaccgctgagctccttgctggtggtatcaatgtgcgaagtggcagtgttgct
gaagccgaaaataccatggtgttcgtggatggccggaataataatctgggaagcactgaa
gcccgggggctggatttctccatgtcggtacccatggaaactgacagcggtgattttaaa
tttggcttgctgggtacctggtttgattactaccgtgttgcgcaaactgctacggctgaa
tctattgatcaggtaaacaatctggattatccggtcagtctgcgtatgcgtggcagcatt
aactggcagcgggattactgggatttaaccctgttcgcaaactacacgaacagttacaac
aatactcttaccggtgaggagatcagctcactgaccacgctggattttgctgcgtcttac
atcttcagtggcggactgagcggcattggcgaagatctcaaagtgggactctttatcaac
aatatcaccgatgaagatccgccttatgccgatatcgccccgtcaaataatggtggtggt
ggtttcgacccgcaggtaggcagcccggtcggacgactcatctcactctcgctgtctaag
agcttctga
DBGET
integrated database retrieval system