Alteromonas sp. RKMC-009: DS731_18960
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Entry
DS731_18960 CDS
T05653
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
alr
Alteromonas sp. RKMC-009
Pathway
alr00040
Pentose and glucuronate interconversions
alr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DS731_18960
Enzymes [BR:
alr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
DS731_18960
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
YNCE
Motif
Other DBs
NCBI-ProteinID:
AYA66677
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Position
4301466..4302803
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AA seq
445 aa
AA seq
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MCKVLLTAAVALMAGALSPAVNAEDIPKSWIDKDTGHRVIRLSEEPGSRSLYFHQNAYSA
DGNSMVISVDNPRGIAVVNLKDGTVKRLFEDPDAGILFMGPASRDVYVTRIEGAGSGEVV
AKNELQQPTEVLAINIDNGRVRHVATVPRGKIHSINKDESLLIGAFAEREYSIESGPRHA
RFEARYEATGKDGKPLTFAEAKEVRINERLEARIPMEMFVVDTQTGEQRTIHKATDWLNH
IQFSPADPDKIMFCHEGPWHKVDRIWTMNVDGSHIQKMHTRSMNMEIAGHEFFDHSGSRI
FYDLQTPRGEVFWLASVDLSSGERIWRHMPRDYWSVHFNISPDGKLFAGDGGDEEMVARA
KDGKWIYLFRDEPINDVAGISAPDAASLIKPATLQAERLVNMADHDYRLEPNVTFTPDNK
WVVFRSNMHGPVHVYAVEVARAQQP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaagtattgctcaccgcagcggttgccctgatggccggggctttgtctccggca
gtcaatgctgaagatattcccaaatcatggattgataaagacaccggccaccgggtaata
cgcctgtcagaagaacccggctcccgctcgctgtactttcatcaaaatgcctacagcgca
gatggcaacagcatggttatttcggtggataaccccagaggaatcgccgtggttaatctg
aaagacgggactgttaagcggctgtttgaagaccctgacgcgggcatattgttcatgggc
cctgccagccgtgatgtatatgtgacccgtatagaaggtgccggaagtggtgaagtcgtt
gccaaaaatgagctgcaacagcccacagaagttctggctatcaatatagacaatggccgg
gtccggcatgttgccaccgtaccgcggggaaaaattcattccatcaacaaggatgaaagc
ctgcttattggtgcatttgcagagcgcgaatacagcattgaatccggtccccgccacgcc
cgtttcgaagcacgctatgaagcgaccggtaaagatgggaaaccgctgacctttgcagaa
gccaaagaagtgcgcattaacgagcggctggaagcacgtattcccatggaaatgtttgta
gtggatacccaaaccggcgaacaacgaaccatacataaagccactgactggctgaatcac
attcagttctcccccgctgacccggacaaaatcatgttttgccatgaaggcccctggcac
aaagtggatcgcatctggacgatgaatgtggatggcagccatattcaaaaaatgcacacc
cgcagtatgaacatggaaattgccggtcatgagttctttgaccacagcggcagccgtatt
ttctacgacttacaaacgccccgcggggaagtgttctggttagccagtgtcgatctttcc
tcaggagagcgtatctggcggcatatgcccagggactactggtcagtgcatttcaacatt
tcccccgacggcaagctgtttgccggtgacggtggcgatgaagaaatggttgccagagcc
aaagacggcaaatggatttatctgttcagagatgaaccaataaacgatgtggccgggatc
agtgcccctgatgcagcgtcattgattaaaccggcaaccttgcaggcagagcgtctggtc
aatatggctgaccacgactaccgccttgaacctaacgttacctttacccctgataacaag
tgggtggtcttccgttctaatatgcatggcccggtgcacgtttacgccgtagaagtggcc
agagcacaacaaccttaa
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