Alteromonas sp. RKMC-009: DS731_21055
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Entry
DS731_21055 CDS
T05653
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
alr
Alteromonas sp. RKMC-009
Brite
KEGG Orthology (KO) [BR:
alr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
DS731_21055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
OB_PDCD11
Terminase-T7_RNaseH-like
T2SSK
OVT1
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AYA66293
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Position
4808134..4810476
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AA seq
780 aa
AA seq
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MIINKIAEELAVNANQVQAAVSLLDEGATVPFIARYRKEATQGLDDTQLRNLEQRLTYLR
ELEDRRSVILKSIEEQGKLTDALRKDITTADSKTTLEDLYLPYKPRRRTKGQIAIEAGLE
PLADKLFNDPSLTPEAEAEAFVSADKGVADTKAALEGARFILMERFAEDASLLAKVRRYL
NDNAFVTSTVAPGKEQEAIKYKDYFDHQEKLKSVPSHRALAMFRGRNEGMLHIQLNADPQ
NEDATAPSHCEFIIADHYNISDKGRAADAFLKQVVQWTWKIKIALHMETELFSGLREQAE
EEAISVFAKNLNDLLMAAPAGAKTTMGLDPGLRTGVKVAVVDKTGKVVATNTIFPHAPQN
AWDKSMRTLINVCKQHKVELISIGNGTGSRETDKLVAEMLKAAPELGAQKIMVSEAGASV
YSASELASKELPDMDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVSQSQLGKS
LDRVIEDCVNAVGVDLNTASPALLSYVSGLNKTLAQNIVAFRDNNGAFGDRKSLLKVERL
GPKAFEQAAGFLRITAGTNPLDASAVHPEAYPVIDSIVDRTQVAVNDLIGNTDLLRKLAP
EDFTSEAFGLPTVKDILKELDKPGRDPRPEFKTATFKEGVETISDLKPGMILEGVVSNVA
NFGAFVDVGVHQDGLVHISALTNKFISDPREVVKAGDIVKVKVLEVDVQRKRISFTMRLD
DTPAPAAEKRQSSAGKPAGKQGKGRQPGRNGGGNNRQAQAPANAAMGNAFADAFAKAKQK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgattatcaacaaaattgccgaagaacttgccgttaatgccaatcaggtgcaggcggct
gtttcattactcgatgagggtgctacggttccttttatcgcccgttaccggaaagaggca
acgcaaggactggacgatactcagcttcgtaacctcgaacagcggctgacgtacctgcgt
gaattagaagatcgccgcagcgtgattttaaagtccattgaagaacagggtaagcttacc
gatgcgctgagaaaggacatcaccacggcggacagcaaaacgacgctggaagatttatac
ctgccctacaagccacgtcgtcgcactaaaggtcagatcgctattgaagccgggcttgag
cctttagctgataaactgtttaacgacccgtcgctgacaccggaagccgaagcagaagca
tttgtttctgctgacaaaggcgtagccgataccaaagccgcactggaaggtgcccgcttt
atcctgatggaacggtttgccgaagacgcttctctgctggcgaaagtacgccgctatctg
aatgacaatgccttcgtaaccagtacagtggctcccggtaaagagcaggaagccattaag
tacaaagattatttcgaccatcaggaaaaactcaaaagcgtgccgtctcaccgtgctctt
gccatgttccgtggccgtaatgagggcatgctgcatattcagctgaacgcagatccgcag
aatgaagatgccacggcaccgtcacactgcgaattcatcattgctgatcactacaatatc
agtgacaaaggccgtgctgctgatgcgtttttaaagcaggttgtacagtggacctggaaa
atcaaaattgctctgcacatggaaaccgaactgttttcgggcttacgtgagcaggctgaa
gaagaagccatcagcgtattcgctaaaaacctcaatgatctgctaatggcggcgccggcc
ggcgcgaaaaccaccatgggtctggatccgggtttgcgtaccggggtcaaagtcgcggtg
gtagataaaaccggtaaggtggtggccactaatacgattttcccccacgcgccgcaaaac
gcctgggacaagtctatgcgcacactgattaatgtgtgcaaacagcataaagtagagctc
atcagtatcggtaacggtaccggctcccgcgaaacggataaactggttgctgaaatgctg
aaagcagcgccggagctgggcgctcagaaaatcatggtcagtgaagccggtgcatcagtg
tactcagcgtcggaactggcatcgaaagaactgccggatatggacgtatctctgcgtggc
gctgtatcaattgcccgtcgtctgcaggatcctctcgccgaactggtaaaaattgagccg
aaggctattggtgttggccagtatcagcacgacgtaagccagagtcagttaggcaaatca
ctggatcgcgttatcgaggactgtgtaaacgccgtaggcgtcgatctgaacaccgcatct
cctgcactgctgtcttatgtatcgggcctgaacaaaaccctggcacaaaatatcgttgca
tttcgcgataacaacggcgcttttggcgaccgtaaatccttattaaaggttgaacggtta
ggtcctaaagcctttgaacaggcagccggcttcctgcgtatcaccgcaggcactaacccg
ctggatgcctccgccgttcacccagaagcctatccggttatcgacagcattgttgaccgt
acgcaggtcgccgtaaacgacctgattggtaacaccgatctgctgcgtaagctggcaccg
gaggacttcaccagtgaagcattcggtttgccaaccgtaaaagatatcctgaaagagctg
gacaaacccggccgtgacccccgtcctgaatttaaaacagcgaccttcaaagaaggcgtt
gaaaccatcagcgatctgaagccgggcatgattctggaaggtgttgtcagtaacgtggca
aacttcggtgctttcgttgacgtgggtgtgcatcaggatggtctggttcacatctcggca
ctgaccaacaagttcatctcggatccccgtgaagtagtaaaagccggtgatatcgtaaaa
gtgaaagtgctggaagtagacgtacagcgtaagcgtatctcttttaccatgcgccttgac
gatacccctgcgccggccgctgaaaaacgccagagcagcgccggaaaacctgccgggaag
caaggtaaaggacgccagcccggccgcaatggcggtggcaataaccgtcaggcgcaagcg
ccggctaatgctgccatgggtaatgcgttcgcggatgcatttgctaaagcaaagcagaag
taa
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