Arcticibacterium luteifluviistationis: DJ013_01300
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Entry
DJ013_01300 CDS
T05496
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
als
Arcticibacterium luteifluviistationis
Brite
KEGG Orthology (KO) [BR:
als00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
als03009
]
DJ013_01300
Enzymes [BR:
als01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DJ013_01300
Ribosome biogenesis [BR:
als03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DJ013_01300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
MTS
Methyltransf_25
N6_N4_Mtase
Cons_hypoth95
RrnaAD
PrmA
TRAM
DOT1
PCMT
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AWV96889
UniProt:
A0A2Z4G6W0
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All DBs
Position
complement(309925..311337)
Genome browser
AA seq
470 aa
AA seq
DB search
MARRKTRKVIDEIEVLDFAAEGKCLTKLDGEVIFITTPNVAPGDIVKLQINRKRKSFSEA
IVLERIKDSEDRVEPFCSHFGVCGGCKWQHISYPDQLAQKEKQVKDQLVRLGKIDISNMK
PILASNKTQFYRNKLEFTFSSTRWLTADEISSSNDLGDRNALGFHIPKRFDKVLPIDTCY
LQDDPSNDIRRFFDEYARNSNEAFYNHVRHEGFFRTLMIRTSSTGDVMVVVQFAKDDKEL
IEACLSAFVEKFPDITSVNYFINQKKNDSYQDLESFFFSGKPYIEEEMEGLRFRIGVKSF
YQTNSEQAYELYKAARELAEIGKDDVVYDLYTGTGTIANFVAHQAKKVVGVEYVEDAIKD
AKINSEVNGIENTAFYAGNMKDVLNDAFVEKEGLPSVIITDPPRAGMDKEVIDTLLRIAA
DRIVYVSCNASTQARDVALLLEKYDVQEIQPVDMFPHTHHVENIVKLKLR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaagaaaaacaagaaaagtcattgacgaaattgaagtgctagattttgcggca
gaaggaaaatgcctcacaaaactagacggagaagttatatttatcactacgccaaatgta
gctcctggagacattgtcaaactccaaattaacagaaaacgtaaaagcttttcagaagca
atcgttttggagagaattaaagactcagaagatagggtagaacccttctgtagtcacttt
ggtgtatgtggtggctgtaaatggcaacacatttcttatccagaccaattagctcaaaaa
gaaaaacaagtcaaagaccaactggttagacttggaaaaatagacattagcaacatgaag
cctattttggcttcaaataagacgcaattctatagaaacaagcttgagtttactttttct
agtacaaggtggcttacagcagacgaaatatcgtctagcaatgatttaggagacagaaat
gcattaggttttcatatccctaagcgatttgacaaagtcttacctattgacacgtgttat
ctgcaagacgacccatcaaatgacataagacgtttctttgatgaatacgctagaaatagc
aacgaagcattctataaccatgtaaggcatgaaggttttttcagaaccttaatgataaga
acatcttctacaggtgatgtgatggtggtggttcagtttgctaaagatgacaaagagctt
atagaagcttgtttgagtgctttcgttgagaaatttccagacattacttctgttaattac
ttcatcaaccagaagaaaaacgacagttaccaagatttagaatccttcttcttttcaggc
aaaccatacattgaagaagagatggagggtttaaggtttagaataggcgtaaagtctttt
tatcaaaccaactcggaacaagcttacgaactttataaagctgctcgtgaattagctgaa
attggcaaagacgatgtagtttacgatttatatacaggaacaggtactattgccaatttt
gtagctcaccaagctaagaaagtagtaggcgtggagtatgtagaagatgctattaaagac
gcaaagattaattcggaggtcaatggcatagaaaacacggctttttacgcagggaacatg
aaggacgttctaaatgacgccttcgtagagaaagaaggtttacctagcgttattattact
gacccacctagggctggaatggataaagaagtgattgatactttattgagaatagctgcg
gacagaattgtatacgtaagttgtaacgcaagcacacaagctcgtgatgtagctttattg
ctagaaaagtatgatgttcaagaaattcaaccagttgatatgttcccacatacgcaccac
gttgaaaacattgttaaactgaaattaaggtag
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