Arcticibacterium luteifluviistationis: DJ013_05075
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Entry
DJ013_05075 CDS
T05496
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
als
Arcticibacterium luteifluviistationis
Pathway
als03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
als00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DJ013_05075 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
als03019
]
DJ013_05075 (rny)
Messenger RNA biogenesis [BR:
als03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DJ013_05075 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4954
KH-I_KHDC4-BBP
KH_2
Replitron_HUH
Motif
Other DBs
NCBI-ProteinID:
AWV97570
UniProt:
A0A2Z4G901
LinkDB
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Position
complement(1173789..1175387)
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AA seq
532 aa
AA seq
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MSEYLLLIVGIVGGLVAGYFIGQSLLKKTSKNQEEEAARKAESILRDAESRAESLRRDTE
SKADSIKRDRKLEAKEHFLKLKAEFEETTNNKKNIIIQNEQKVRTLQQQAASLMEKNKRE
ESELQSQKDRVTNQLEAATKREEEAEKQLSLHVQQLEKIAGLSADQAKEQLMDALKAEAE
SNASAFVKQSIEEAKLSATKEAKKIVIQTIQRTAAEQAIENCVSVFNIESDEIKGKIIGR
EGRNIRALEAATGAEIIVDDTPEAIVISSFDPVRREVTRLALHRLVTDGRIHPARIEEVV
NKTRKEIDNEIIEIGEKTVLDLGIHGLHPELIKMVGRMRFRSSYGQNLLQHSREVAKLCA
TMAAEMGMKVKLAKRAGLLHDIGKVYQEESDLPHAILGMELAKKYKENPEVCNAIGAHHD
EIEMTSLISPVIQVCDAISGSRPGARREMMDSYVQRLRDLEELALDFKGVEKCYAIQAGR
ELRVIVDAENVNDETASMMSFNISQKIEKEMQYPGQIKVTVIREMRAVAYAK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatatttattgttaattgtaggcatcgtaggaggcctagtggctggatacttt
atagggcagtcgctactgaaaaaaactagtaagaatcaagaagaagaagccgcaagaaag
gctgaaagtatccttagagatgcggaatccagagcggaaagcttaagaagagatacagag
tctaaagctgatagcattaagcgagataggaaattagaagccaaagagcatttcttgaaa
ttgaaggcggagtttgaagaaaccaccaacaataagaaaaatatcattattcagaatgag
caaaaggtacgcacgcttcaacagcaggcggcttccttaatggagaaaaacaaaagagaa
gagtctgaacttcaaagccaaaaggatagagttaccaatcaattagaagcagccactaag
agggaagaagaagctgaaaagcaattgagccttcatgtacagcaattggagaaaatagca
ggtttatctgcagaccaagccaaagaacaattgatggatgctttgaaggcggaagcagag
tctaatgcatcggcttttgtgaagcagtctatagaagaagcgaaactttcagctactaaa
gaagcgaagaaaattgtaatccaaactattcaaagaactgcagcagagcaggcgattgaa
aactgtgtgtcagtttttaatattgaaagtgatgaaattaaaggaaagattataggtaga
gaaggccgtaacattagagctttagaagccgctactggtgccgagattattgtggatgac
acgccagaggctattgttatttctagttttgacccagtaagaagagaagttacacgactt
gctttacataggttggttactgacggtagaattcatcctgcaagaattgaagaggttgta
aataagactagaaaagaaattgacaacgaaattatcgagataggagagaaaacggtgcta
gaccttggtattcacggcttacatccagaacttatcaagatggtaggtcgaatgagattc
cgttcgtcttatggtcaaaacttattacaacattccagagaagtggctaagctttgtgct
accatggcggctgaaatgggtatgaaagttaaactggctaaaagagcaggtcttttgcat
gatattggaaaagtgtaccaagaagagtctgatttgcctcacgctatcttaggtatggaa
ctagccaaaaaatataaagagaacccagaagtttgtaatgccataggtgctcaccatgat
gagatagagatgacttcattaatatctccagtaattcaggtttgtgatgccattagtggt
tcaagaccgggagccagacgtgagatgatggattcttatgtgcagcgtctaagagattta
gaagagcttgctcttgactttaaaggagtagagaaatgttacgctattcaggctggtaga
gagcttagagttatagtggatgcagaaaatgtaaatgacgaaacagcgagcatgatgtcg
tttaatatctctcagaaaattgaaaaggaaatgcagtacccaggtcaaatcaaagtaacg
gtaattcgtgaaatgagggcggtggcttatgcgaaatag
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