Arcticibacterium luteifluviistationis: DJ013_12160
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Entry
DJ013_12160 CDS
T05496
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
als
Arcticibacterium luteifluviistationis
Pathway
als03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
als00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DJ013_12160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
als03019
]
DJ013_12160
Enzymes [BR:
als01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DJ013_12160
Messenger RNA biogenesis [BR:
als03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DJ013_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
P-loop_SecA
Fe-ADH
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AWV98885
UniProt:
A0A2Z4GCX8
LinkDB
All DBs
Position
complement(2978577..2979815)
Genome browser
AA seq
412 aa
AA seq
DB search
MSFEKLGLSQALLQAIDKKGYTQPSPIQEKAIPEVLNRRDVLASAQTGTGKTAGFTLPIL
QLLSEGEQPRKRTIRSLILTPTRELAAQIYDNVREYSEFLDIRSTVIFGGVNQNPQVRTL
RQGVDILIATPGRLLDLHNQKALSLSNVEILVLDEADRMLDMGFLRDIKKIMALLPSKRQ
NLLFSATFSKEIKKMSGEFLRNPVLVEATPENTTAEKVDHMIYLADKGDKTALTIKLISE
GNWTQVLVFTRTKHGANRLSEKLGKKGISSAAIHGNKTQNARTRALAGFKNGEIRVLVAT
DIAARGLDIPLLPYVINFELPNISEDYVHRIGRTGRAGASGNAISLVCIDEYEYLRGIEK
LLNQKLPSEIIPGYEPVDKPEPKADKKQNNRRPNNRSSRDGNASGGRKNFRR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgaaaaattaggcttgtctcaagcattattacaggccattgataaaaaaggt
tacactcaaccttctccaattcaagaaaaagcaattccagaagttttaaatagaagagac
gttttagcttcggctcaaacaggaacaggaaaaacagcaggttttactttacctatctta
caattactctcagaaggagagcaaccaagaaaaagaactattagaagtttaattctaaca
cctactagagaattagctgctcagatatacgataacgtaagagagtatagtgagttttta
gatattaggtctaccgtgatttttggtggtgtaaaccaaaacccacaagtaagaactctg
agacaaggggttgatattttaatagccacaccaggaaggttacttgatttacataatcaa
aaagcactctcattaagtaatgtagagattttggttttagacgaggccgatagaatgctc
gatatgggtttcttgagagacataaaaaagattatggctctgttgccttctaaaagacag
aacttattattctccgctactttttccaaagagataaagaaaatgtcaggggagtttttg
agaaaccctgtattagtagaggctacgccagaaaacaccactgctgaaaaagtagatcac
atgatatacttagcagataagggagataaaactgctttaactatcaagttgatttctgaa
ggaaactggacacaggtcttagtttttactagaaccaagcatggagctaacaggctaagt
gaaaaacttggtaaaaaaggtatttcttctgccgctattcacggtaataaaactcaaaat
gcgagaaccagagctttagcaggttttaaaaatggagagatacgagttttagtcgctaca
gatatagctgctcgtggtttggatattccattactaccttatgttatcaattttgagcta
cctaatatatctgaagattatgttcatagaataggtaggactgggcgtgctggtgctagc
ggaaatgctatctccttagtatgtattgacgaatatgaatatttacgaggaattgagaaa
ttattgaatcaaaaattgcctagtgaaattataccagggtatgaacctgtagacaagccg
gaacccaaagcggataaaaaacagaacaatagaagaccgaataacagaagtagtagagat
ggaaatgcttctggtggaagaaagaattttagaagataa
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