Alteromonas naphthalenivorans: ambt_00065
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Entry
ambt_00065 CDS
T01513
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt03030
DNA replication
alt03410
Base excision repair
alt03420
Nucleotide excision repair
alt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ambt_00065
03410 Base excision repair
ambt_00065
03420 Nucleotide excision repair
ambt_00065
03440 Homologous recombination
ambt_00065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alt03032
]
ambt_00065
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_00065
Enzymes [BR:
alt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ambt_00065
DNA replication proteins [BR:
alt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ambt_00065
DNA repair and recombination proteins [BR:
alt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ambt_00065
NER (nucleotide excision repair)
GGR (global genome repair) factors
ambt_00065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AEF01576
UniProt:
F5Z976
LinkDB
All DBs
Position
complement(15357..18164)
Genome browser
AA seq
935 aa
AA seq
DB search
MTDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIRQYNPTHMAV
IFDAKGKTFRDDIYEEYKANRPPMPEELRSQIEPLHTIIKAMGLPLIVESGVEADDVIGT
LACRATEHGIDTLISTGDKDMAQLVNENVTLINTMTDQIMDIEGVNTKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGISAIYDNLDKIADLSFRGSKTMATKMQEYE
EQARLSYTLATIAIDLDLQYKIDELCPTLPDNETLQSMFAEFEFKRWHTEISALLASDGN
EPSKAENGKSTSDASDSESNDTDVAQPESNIDKSGYDVVLDEATFEAWIEELKAAPLIAV
DTETTSVNYMEAELVGVSFCIEPGAAAYVPVAHDYPDAPTQLSRDYVLSALKPILESETI
IKVGQHIKYDKNVLAHYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFE
EIAGKGAKQLTFNQIGLEEAGPYAAEDADITMRLHQAIWAKLENEPKLKALLVDVEVPVA
CVLSRMEQQGVLIESQRLRQQSQDLATRIAELEKEVHEEAGEVFNLGSPKQLQHILFEKM
SLPVIKKTPKGAPSTSEEVLQELALEFPLPKKLMEYRGLTKLKNTYTDKLPKMINHRTGR
VHTSYHQAITATGRLSSTDPNLQNIPIRNEEGRKVRQAFVPREGYKIVAADYSQIELRIM
AHLSGDEGLLDAFAHGRDIHKATAAEVFGVTLDEVTTEQRRSAKAINFGLIYGMSAFGLA
KQLNIPRHEAQKYMDLYFERYPGVLEYMDSTREGAKEKGYVETVFGRRLYLPDIKASNGA
RRKGAERAAINAPMQGTAADIIKMAMIKVDDWITSLESDDVLMMMQVHDELVFEIREEHL
EEQVKNIVSLMEQAAVLNVPLVVDAGVGDNWDEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcgaaaaagcccccttttattctagtagatggatcatcttatctatttaga
gcatttcacggattgccgcccctgacgaactcaaaaggtcaggataccggtgcgatctat
ggtgttgtcaacatgctgaaaagcttgattagacaatacaatcctactcacatggcagtc
atcttcgatgccaaaggtaaaacgtttcgcgacgatatttatgaagaatataaagcgaat
cgcccacctatgccggaagagttacgcagtcaaatagaaccattgcacaccatcattaaa
gcgatgggtttacctctcatcgttgagtctggcgttgaagccgatgatgttattggtacc
ctggcctgtcgcgccacagaacatggtattgataccctaatcagtactggcgataaagat
atggcacaactggtcaacgaaaatgtcaccttgatcaataccatgacagatcagattatg
gacattgaaggggtaaatacgaaattcggtattccaccagaactggttatcgatttctta
gcccttaaaggtgacaaagtcgataacattcctggcgtacctggtgtgggtgataaaagt
gcacaagcactgttaaatggtattggtggcatcagtgctatctatgacaaccttgataaa
attgccgatctctcgtttagagggagcaagaccatggcaactaaaatgcaagagtatgaa
gaacaagctcgcctgtcgtacacccttgccacgattgccattgatttagatctacaatac
aaaatagatgagctttgtcctacattaccagataatgaaaccttacagtcgatgttcgca
gagttcgaattcaagcgctggcatacagaaattagcgcattgctcgcaagtgatggtaat
gaaccttcaaaagcagaaaatggaaaaagtacgtctgacgctagcgattctgaatctaac
gatactgacgtagcacagccagaaagtaatatcgataagtcaggctatgatgtggtgctt
gatgaagctacatttgaggcttggatagaagagctaaaagcagcgccgcttattgctgtt
gatactgaaacgaccagtgttaactacatggaagctgaacttgttggtgtttctttttgc
atcgaacccggagctgcggcttacgtgcctgttgctcatgattatcccgatgcacccacg
cagttatcacgagattacgtactttcggcattgaagcctattttagagtctgaaaccatc
attaaagtgggccagcacattaaatatgacaagaatgtactcgcccattatgacataacg
ttaaatggcatcggctttgacactatgctggaaagctatgtgttaaacagtaccgcgcag
cgccatgacatggactcgctagccctagcttatttaggtcataaaacaattcactttgaa
gaaattgcaggtaaaggtgccaaacagcttacttttaatcaaattggattagaagaagca
ggtccttacgccgctgaagatgctgatattacaatgcgccttcatcaagcaatatgggca
aaactagaaaacgaacccaagcttaaagcactattggttgatgttgaggtgccggttgct
tgtgttttatctcgtatggaacagcaaggcgtattaattgaaagccaacggttgcgccag
cagagccaagacttagctacgcgtattgctgagctagaaaaagaagtgcatgaagaagcc
ggcgaagtgtttaacttagggtcgccaaaacagcttcaacacattttgttcgagaaaatg
tcgttaccggttattaagaaaacccccaaaggcgccccttctacttctgaagaagtatta
caagaactcgcccttgagttcccgttacctaaaaagttaatggagtatagagggttaacc
aagcttaaaaatacgtataccgacaaactccctaaaatgattaatcatcgtacgggtcga
gttcatacttcttaccatcaagctattacggcaacgggccgcttgtcgtcaacggatcct
aaccttcaaaacattcctattcgaaatgaagaaggccgtaaggtaagacaagcatttgtt
ccacgtgaaggttacaagattgtagctgccgattattctcaaattgaacttagaataatg
gctcatttgtcgggcgatgaaggtcttcttgatgcatttgcacatggcagagacattcac
aaagcgaccgctgcagaagtgtttggggtaacccttgacgaagtgacgacggaacaacgt
cgtagtgctaaagctataaactttggtttgatctatggaatgagtgcctttggccttgct
aaacaacttaatattccacgtcacgaagcacaaaaatacatggacttgtattttgaacgc
tacccgggcgtactagagtacatggacagcaccagagaaggcgctaaagaaaaaggctac
gtggaaactgtgtttggtcgacgcttgtacctacccgacattaaagccagtaatggcgca
cgtcgcaaaggggcagagcgcgcagcaatcaacgcacctatgcaaggtacagctgccgac
atcattaaaatggccatgataaaggttgatgattggatcacctcacttgaaagtgacgac
gtactcatgatgatgcaggtacacgatgaattggtatttgagattagagaagaacatcta
gaggaacaagttaaaaatatcgtcagcttaatggagcaagctgcagtattaaatgtgccg
ctggtggttgatgcgggcgtgggcgataactgggatgaagctcactaa
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