Alteromonas naphthalenivorans: ambt_01965
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Entry
ambt_01965 CDS
T01513
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ambt_01965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_01965
Enzymes [BR:
alt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ambt_01965
DNA repair and recombination proteins [BR:
alt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ambt_01965
Prokaryotic type
ambt_01965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
IFT43
Motif
Other DBs
NCBI-ProteinID:
AEF01947
UniProt:
F5ZAH7
LinkDB
All DBs
Position
461412..462071
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AA seq
219 aa
AA seq
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MTTWAQALGSEEDKPYFKALMQKVESEREAGKVIYPPSEDVFNALTMTPLEKVKVVILGQ
DPYHGPHQAHGLCFSVLPNIKTPPSLVNIYKELANDITDFSIPNHGTLTSWAEQGVLLLN
TVLTVEQGKANSHAKWGWETYTDALIEAINTHAENVVFLLWGSHAQKKGKHIKRTKHCVL
HAPHPSPLSAYRGFFGCHHFSDTNAYLASKGLSPILWQV
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacatgggcacaagcattgggcagtgaagaagataagccttacttcaaagcccta
atgcaaaaagtagaatctgaacgtgaagcgggtaaagtcatttacccgccttcagaagat
gtatttaacgccctgacgatgacaccgctagaaaaagtaaaggtggtgatattggggcaa
gatccttatcacggcccacatcaagctcatggcttatgcttctcggtattgccaaacatt
aaaacacctccctcgctggttaatatttataaagaattagccaatgatattaccgacttt
tccattccgaaccacggcacgcttacctcttgggccgaacaaggtgtactgctgcttaat
accgtgttaacggtagagcagggcaaggcgaatagtcatgccaagtggggatgggaaact
tatactgatgcgctaatagaggcaattaacacgcacgcagaaaacgtggtgtttttattg
tggggcagtcatgcacaaaagaaaggcaagcatatcaaacgcactaagcactgtgtgcta
catgcgccacatccgtcaccgttatcagcctaccgaggcttctttggctgtcaccacttt
agcgacaccaatgcctacctagcaagcaaaggactttcacccattctttggcaggtatag
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