Alteromonas naphthalenivorans: ambt_04400
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Entry
ambt_04400 CDS
T01513
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ambt_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_04400
Enzymes [BR:
alt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ambt_04400
DNA repair and recombination proteins [BR:
alt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ambt_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
YihI
TACC_C
Motif
Other DBs
NCBI-ProteinID:
AEF02430
UniProt:
F5ZCB2
LinkDB
All DBs
Position
complement(1020738..1021001)
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AA seq
87 aa
AA seq
DB search
MSAIVTKVTKKTNSPSFEETLTELDAIVNEMENGELPLNVALEKFERGIALSREGQKSLE
QAEQKVKILLNEQGESALHPLPEDEQP
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgattgtgacgaaagtgacgaaaaagacaaattctccctcgtttgaggaaacc
cttaccgaattagatgcaatcgttaatgagatggaaaacggtgagttgccattaaacgtt
gcactagaaaaattcgagcgaggcatagccctttcccgcgaaggtcagaaatcgttagag
caagccgagcaaaaagttaaaattttgcttaatgagcaaggcgaaagcgcattacaccct
cttcctgaagacgagcaaccttaa
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