Alteromonas naphthalenivorans: ambt_04550
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Entry
ambt_04550 CDS
T01513
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt03030
DNA replication
alt03430
Mismatch repair
alt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ambt_04550
03430 Mismatch repair
ambt_04550
03440 Homologous recombination
ambt_04550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alt03032
]
ambt_04550
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_04550
Enzymes [BR:
alt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ambt_04550
DNA replication proteins [BR:
alt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ambt_04550
DNA repair and recombination proteins [BR:
alt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ambt_04550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_14
RuvB_N
AAA_5
AAA_22
AAA_2
AAA_18
Rad17
ResIII
AAA_16
AAA_19
AAA_7
AAA_assoc_2
nSTAND3
AAA_24
ABC_tran
DUF1122
Motif
Other DBs
NCBI-ProteinID:
AEF02460
UniProt:
F5ZB25
LinkDB
All DBs
Position
1058416..1061349
Genome browser
AA seq
977 aa
AA seq
DB search
MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEEGQGSNPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSR
EQIVGQLNHILEQETLPFEPQALALLARAAQGSMRDALSLTDQAIAQGGNAVNASVVTDM
LGLMDKNQLVKLLHAVVSKTPADVMQLVQDMSEQAPDYDHVLAELGSTLHQIALTQWVPE
ACKLETTSAKAIYQLAKSISAEQVQLLYQIALQGRKDLPFSSDGRSALEMTLMRMMTFAP
STPLADAPSEIASGTVDSSLPIASAEKKTLISEQDAQSTTSTANSLSAKSTDAGSSSAGE
EAFSNEQDAHSANVQDAETATDETDRARTHEISSSSDIADLATSQNTPPEPGASAHEKES
YGEAASQQVASFEQAEPSQQVKPSQSVAYSKDGQPSDANQSVINNQPTGSDHSTGSDHFT
GNDQPTGSNQPAGEYGKPVRSLASEHTPSDSAPFNDMPPADAYMDDMPPPYDDDESSFMP
PDFADAQRTNTPLSDEGPDTQSTHFASQQAVDSVPAATPTPEAQLTSTADMLALRQRLKQ
KRDESAEQAAKKPEATNETTSFVDRMSKASSQSSLDPSSEGRDDRQSKGTADDISAQQES
TTAPATAPSSSDTFNANLDVGSNTTSNASMQNQTDMPPWDTGMQHNDEPFTANEQDTHFD
SPMPDAAQYGGNSETARNEPQTLESEPLEPQPLESEPSDTRNEFSAEPVNQFKSQYQGKL
AAYLDDGSKLVHASQIDKWSNDVEQMPIAGLLKQLVLHASFLRNDQGITLEIDNSQAHLL
KDSAKQQLLDVLHHSFGEGENITITLGSPKQTPYALQQDIIAMRQAHAQSVVHTDETIQA
LLSAFDASIVTDSVKAR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtattagcacgtaaatggcgcccgggtaagtttagtgaactcgtaggg
caggaacatgttgtttcagctatttcgaatgcgttagataacgaccgcttgcaccacgcg
tacctatttaccggtacgcgaggggtaggtaaaaccaccattgctcgtatattttccaag
agtttaaactgcgaagaagggcaggggtctaacccttgtggtcaatgtaatacctgtaaa
gaaatagagcagggtaattatgttgatttgcttgaaattgatgcggcatcacgcacaaag
gtagaagatacccgagagctacttgataacgtacaatacaagcctacccgcggccggtat
aaagtgtatcttattgatgaagtacacatgctgtctaagcatagctttaatgcgttgtta
aaaacgttagaagagccaccacctcacgttaagtttttactggccacgaccgatccacaa
aagcttcctattactattttatctcgttgcttgcagttcaatttaaaagcattgtcgcga
gagcaaatagttgggcagcttaatcatattctagagcaagaaaccttaccctttgagccg
caagcgctagcgttgttagcccgcgctgcacaggggagtatgcgtgatgccttaagctta
accgaccaagctattgcacaaggtggtaatgcggttaacgcctcagtcgttaccgacatg
ctaggcttgatggataaaaatcagcttgtgaagttattgcatgcggtggtgagtaaaacg
ccagccgatgttatgcaattggttcaggatatgtcggaacaagcaccagattacgatcat
gtgcttgccgaattaggcagtacgctacatcaaatagcgttaacccaatgggtgcctgaa
gcctgtaaattagaaacaacttcagccaaagctatttaccaacttgctaaatcaatttct
gctgaacaagtgcagttgttgtatcaaattgcgctgcaaggaaggaaggacttaccattc
tcatcagacggcaggagcgcattagaaatgacgttaatgcgtatgatgacatttgcacct
agtacgcctttagctgatgcgccatctgagatagccagcggaacggttgatagttcgttg
cctattgcatcggcggaaaaaaaaacactaatttctgagcaagacgcgcaaagcacgact
tctaccgctaactctcttagtgctaaaagcacagacgctgggtcatcgtcagccggtgaa
gaggctttcagcaatgaacaagatgctcacagtgcaaatgttcaagatgcagaaactgct
actgatgaaaccgaccgcgcacgaactcacgagatttcatcttcttctgacatagcagat
ttagccacttcacagaataccccccctgaaccaggagcctcggctcatgaaaaagagtcg
tatggcgaagccgcttcgcaacaggtagcgtcttttgaacaggcagagccttcgcaacag
gtaaagccttcccagtcggtagcgtattcaaaagatggccagccgtcagatgccaatcag
tctgtaataaataatcagcctacaggtagtgatcattctacaggtagtgatcattttaca
ggcaacgatcagcctacgggtagcaatcaacctgcaggtgagtatggcaagccagtcaga
agtttggcgtcagagcatactccttcagattcggccccgtttaatgatatgccgccagca
gatgcatacatggacgatatgccaccgccttacgatgatgatgagtcgtcatttatgccg
cctgatttcgccgatgctcagcggacaaatacaccgctatctgatgaaggccctgacacg
caatctacacattttgcttcgcagcaagctgttgattctgtgccagccgctacacccaca
ccagaggcacagctaacatccactgctgatatgctcgcgctacgacagcgattaaagcaa
aaacgtgatgaaagcgcagaacaagcggcgaaaaagcctgaagcgacgaacgaaactact
agctttgtagatagaatgagtaaggcttcaagccaaagctctcttgacccttctagtgaa
ggccgagatgataggcaatctaaaggcacggctgacgacatcagtgctcaacaagaatca
actactgcaccggcaactgcgccatcaagctctgatacttttaatgcaaatttagatgtt
ggctctaacacgacttctaacgctagcatgcaaaaccaaaccgatatgcccccgtgggat
actggtatgcagcataatgacgagccgtttactgccaacgagcaagatacccactttgat
tcaccaatgcctgacgcggcgcagtatggcggcaatagcgaaacagctcgtaatgagcct
cagactttagaatcagagcctttagaacctcagcctttagaatcagagccaagcgatacc
cgtaatgaatttagtgctgagccagtaaatcagttcaaaagtcagtatcaaggtaagcta
gctgcgtatttggatgatggtagtaagcttgttcatgcgagccaaattgataagtggagc
aatgacgtagagcaaatgcctattgcaggtttgcttaaacaattggtgcttcatgcctct
tttttgcgaaatgatcagggtataacgcttgaaattgataacagtcaggcgcatctacta
aaagacagtgcaaaacaacagttgcttgatgtattgcatcatagttttggcgaaggggag
aatattaccatcacccttggctcgccaaaacaaacgccctatgcgttgcaacaagacatt
attgctatgcgccaagcgcatgcacaatcggtagtacataccgacgaaacaatacaagcg
ttgttatcagcgttcgacgcatcaatagtgaccgactcggttaaagcgcgatag
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