Alteromonas naphthalenivorans: ambt_08120
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Entry
ambt_08120 CDS
T01513
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
alt
Alteromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_08120
Enzymes [BR:
alt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ambt_08120
DNA repair and recombination proteins [BR:
alt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ambt_08120
Prokaryotic type
ambt_08120
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEF03152
UniProt:
F5Z7V9
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All DBs
Position
1838996..1840420
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AA seq
474 aa
AA seq
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MWFRQDLRVKDNPALNAACDEGKIIPIYIYDDNATDGRALGGASNWWLHHSLNSLNDRLN
GHLKVFKGDPKALIPALMEAYEAKGIYWNRCYEPWQINRDKAIKKQLLDNDYEAHSSNGS
LLWEPMKVLKKDGTPYRVFTPYYRKGCLNVEPPRYPQAPPARITYADVDDSKITKANHSC
NIDDLNLLPSLGWDSDFKNHWKPGEDGAADNLQYFIQHAARKYKDARDIPSMNGTSHLSP
HLHFGEVSPNQVWYAIKDRFETSEDKSIDTYLSELGWREFSYYLLYHFPTIPTKNFNDKF
DKFNWRSDAKSLKAWQTGQTGIPIVDAGMRELWQTGYMHNRVRMIVGSFLVKNLLISWQE
GERWFWDCLVDADLASNTAGWQWVAGTGADAAPYFRIFNPLLQGEKFDKQGKYVRKYCPE
LADLPDKYIHKPWDAPPVIAKDAGVHLGDTYPKPIVDLKASRQRALDAFQALKE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcagacaggaccttagagtaaaagataaccccgcgttaaatgccgcttgtgat
gaaggaaaaataatcccgatttacatttacgatgataatgcgaccgatggaagagcatta
ggaggcgcgagtaattggtggttacatcattcattgaattcactgaacgacagattgaat
ggtcacctaaaagtatttaaaggcgatcctaaagcgcttatccctgcattaatggaagcc
tatgaagcgaagggaatctattggaatcgctgttatgagccttggcaaattaatcgagat
aaagcgataaaaaagcagcttttagacaatgactatgaggcgcacagcagtaatggtagc
ttgctgtgggagccgatgaaggtgctcaaaaaagacggcacgccataccgagttttcacc
ccatattatagaaaaggttgtttgaacgttgagcctccacgctatcctcaagcaccgcca
gcacgaattacatacgccgatgttgatgatagtaaaattactaaggctaaccactcttgc
aatatagacgatctcaacttacttccgtccctcggttgggacagtgattttaaaaatcac
tggaaaccaggtgaagacggggccgctgacaatttgcaatattttatccagcacgctgcc
cgcaaatataaagatgcccgtgatattccgtcaatgaatgggacttctcacctgtcacct
catctgcattttggcgaagtgtcgcctaatcaagtctggtatgccattaaagacaggttt
gaaaccagtgaagataaaagcatagatacttatctcagtgagttgggctggcgcgagttt
agctattacttgctttaccattttccaaccataccgaccaaaaattttaatgacaaattt
gataagttcaattggcgcagtgatgcaaaatcgcttaaagcgtggcaaacagggcaaact
ggcatccctattgttgacgcgggtatgcgagagctgtggcaaaccgggtatatgcacaac
cgtgtacgtatgattgtagggtcgttcttggttaaaaaccttcttattagttggcaagaa
ggcgaacgttggttttgggactgcctagtagacgcggatttagccagtaatactgctggg
tggcagtgggtagcaggcacaggcgctgacgctgcaccctatttcagaatttttaacccg
ttattacagggagaaaaatttgataaacaaggaaagtacgtcaggaagtactgccctgaa
cttgccgaccttcctgataaatacatacataagccttgggatgcgccgccggtcattgct
aaagatgcaggagtacatttaggggatacttatcctaaacctatcgtagatttaaaagca
tcgagacagcgtgctttagatgcctttcaggctttaaaagagtag
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