Alteromonas naphthalenivorans: ambt_08125
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Entry
ambt_08125 CDS
T01513
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
alt
Alteromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_08125
Enzymes [BR:
alt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
ambt_08125
DNA repair and recombination proteins [BR:
alt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
ambt_08125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AEF03153
UniProt:
F5Z7W0
LinkDB
All DBs
Position
1840428..1841966
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AA seq
512 aa
AA seq
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MASLILILGDQLTRNLPVLENAKKVQDTVLMAEVREEATYVKHHKKKIVFLFSAMRHFAK
ALKEDNFNVNYIEYNDESNQGSLLEQVKYTLASGDFDNVKVTSPGEYRLLKSMQQWEQSL
GVPVSIINDARFLASPKEFSDWAHDRKQLRMEFFYREMRRKHGILMEDKSPIGGKWNYDA
QNREPMPAGTNVPTHTQFKIDAITQDVIDLVEKEFSDHFGDISPFHFAVTRDDALTVLSD
FIEERLPHFGQYQDAMVEGKPWLYHSHIAFYLNCGLLSPKEAIDAAESAYYAGTAPLNSV
EGFIRQILGWREFVRGFYWHFMPSLKSDNYFNHNRSLPDFFWNGQTNMNCMRQCIKETQA
NAYAHHIQRLMVLGNFCLLTGLSPEEVQQWYLLVYADAYEWVELPNVAGMALYSDGGQLA
SKPYVASGSYINKMSNYCKNCGYQVSKKTGPKACPFNYLYWHFIDKHKEKLSGNPRMAMM
YKTHGRMKDENINAMKDSVTIFLTKLSENEEV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttaatacttattttaggtgatcagcttactcgcaacctgcctgttttagaa
aacgcaaaaaaagtgcaagataccgtgcttatggcagaagtacgtgaggaagctacttac
gtaaagcatcacaaaaagaaaattgttttcctctttagtgccatgcgacatttcgcaaaa
gcgttgaaagaagataattttaacgtcaactatattgaatataacgatgagtcaaaccaa
ggcagtttgctcgaacaagttaaatatacgctagcgagcggcgactttgataatgtcaaa
gtgacatcacctggcgaatatcgtttactgaaaagcatgcagcaatgggagcaatcctta
ggtgtgcctgtcagcataatcaacgacgctcgttttctcgccagccccaaagaatttagt
gattgggcacatgatagaaaacaattgcgtatggaatttttctaccgagagatgcgaaga
aaacatggcatcttgatggaagataaaagccctattggtgggaagtggaattacgacgcg
caaaaccgagagcctatgccggcgggtactaatgtgccgacccacacgcaattcaagata
gacgctattacccaagacgttattgatttagttgaaaaggagtttagcgatcattttggt
gacattagcccatttcactttgccgttacccgcgacgatgcgctaacggtgcttagcgac
ttcatagaagaacggttaccccattttggccaataccaagatgccatggttgaaggcaaa
ccttggttatatcactcccatatcgcgttttatttaaattgtggtttgcttagcccgaaa
gaagccattgatgctgcggaatcggcttattacgcgggcactgcgccgcttaactcggtt
gaaggttttattcgccaaatactggggtggcgggaatttgttagagggttttattggcac
tttatgccaagccttaagagcgataattatttcaaccataatcgctcactccccgatttc
ttttggaatggccaaaccaacatgaactgcatgcgccaatgcataaaggaaacacaagca
aacgcgtatgctcatcatatacagcgattaatggtgctggggaatttctgtcttttaacg
gggttgtcacccgaagaagttcaacaatggtacttgctggtttatgcagatgcgtatgaa
tgggtagaactaccaaatgtagcaggcatggccttatacagtgatggcggtcaactcgcg
agcaaaccttatgtcgccagtggtagctatattaataaaatgtcgaactactgcaaaaac
tgcggttatcaagttagtaaaaaaacaggtcctaaggcttgcccgttcaattacttatac
tggcattttatcgataagcataaagaaaagctaagcggtaatccaagaatggcaatgatg
tataaaactcatggccgcatgaaagatgaaaatataaacgcaatgaaagacagcgtgaca
atttttttaactaaattatctgaaaatgaagaagtctga
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