Alteromonas naphthalenivorans: ambt_08505
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Entry
ambt_08505 CDS
T01513
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
alt
Alteromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alt03032
]
ambt_08505
03036 Chromosome and associated proteins [BR:
alt03036
]
ambt_08505
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_08505
DNA replication proteins [BR:
alt03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ambt_08505
Chromosome and associated proteins [BR:
alt03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ambt_08505
DNA repair and recombination proteins [BR:
alt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ambt_08505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AEF03229
UniProt:
F5Z836
LinkDB
All DBs
Position
complement(1914277..1914564)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIERLADQARQIPAKDLELAIKELLEQMAQTLQKGDRIEIRGFGSFSLHYRAPRV
GRNPKTGETVELDGKYVPHFKPGKELRERVDASIA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattaattgaacggctcgcggatcaagcgcgtcaaattcctgcaaaa
gatcttgaactggcaattaaagaacttctcgaacagatggcccagacccttcaaaaaggc
gacaggattgaaattcgaggcttcggcagtttttcattacattaccgcgctccgcgcgtg
ggacgtaacccgaaaactggcgaaacagtagagttagatggcaaatatgtccctcacttt
aagccaggaaaagagcttcgagaaagagtagacgcctccatagcttaa
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