Alteromonas naphthalenivorans: ambt_11130
Help
Entry
ambt_11130 CDS
T01513
Name
(GenBank) DNA-binding transcriptional activator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
alt
Alteromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alt03000
]
ambt_11130
Transcription factors [BR:
alt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ambt_11130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AEF03748
UniProt:
F5ZCY6
LinkDB
All DBs
Position
complement(2487801..2488694)
Genome browser
AA seq
297 aa
AA seq
DB search
MHRRLPPLNALKAFEAAARHLSFTKAADELFVTQAAVSHQIKALEEFLSMKLFIRRNRTL
LLTEEGQAYFLELKDIFKNLQEATERLLARGSKGAITVAMPPSFASQWLVPRISQFSVAQ
PDIDVRIKAVDFDEGFLDDDVDVAIYYGKGRWSGLQADKLHREFLTPLCSPMLFNGPKPL
SSLADLRHHVLLHDLSRAAWKNWLKHVGVSGVNVNQGPVFSHSMLVLQAAALGQGIALGN
TVLARPELDAGRLIMPFEEKVESRDAFYLVCEESQAELGKIAAFREWILGLVEEEQE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgacgtcttccccctctaaatgcgctaaaagcctttgaagcggctgcccggcat
ttgagtttcactaaagcggcggatgagctttttgttacgcaagccgcggtcagtcatcaa
attaaagcgcttgaagaattcttatcgatgaagttattcattcgtcgtaacagaaccttg
ttattaaccgaggaaggccaggcttacttccttgaattaaaagatatctttaaaaacctg
caagaagcgacggaaagactactcgcaagaggcagtaagggcgccataactgttgccatg
ccgccgagctttgccagccagtggttagtgccacgaattagtcaatttagtgttgcgcaa
ccggacatagacgtaagaataaaagcggtagacttcgatgaaggctttttagacgatgac
gtagatgttgctatttactatggcaaaggccgctggagtgggttgcaagcagacaaactg
caccgtgaattcctaacaccattatgttcccctatgcttttcaatggccctaagccgtta
tcgagtttggcagatttacgtcatcacgtgctccttcacgacttaagccgcgcggcgtgg
aaaaattggcttaaacatgtgggtgtgtcgggcgtgaatgtaaaccaagggccggttttt
agtcattctatgttggtactgcaagctgccgcgttggggcaggggattgcgttaggtaat
accgtacttgcccgtccagaattagatgcagggcgattaattatgccttttgaagagaaa
gtagaaagtcgtgatgccttttatttggtgtgcgaagaatcccaagctgagcttggtaaa
attgccgctttcagagagtggatcttaggcttggttgaagaagagcaagagtga
DBGET
integrated database retrieval system
