Alteromonas naphthalenivorans: ambt_12120
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Entry
ambt_12120 CDS
T01513
Name
(GenBank) Holliday junction DNA helicase motor protein
KO
K03550
holliday junction DNA helicase RuvA
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ambt_12120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_12120
DNA repair and recombination proteins [BR:
alt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ambt_12120
RecFOR pathway proteins
ambt_12120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
Transposase_20
HHH_3
IMS_HHH
HHH_8
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
AEF03944
UniProt:
F5ZDI2
LinkDB
All DBs
Position
complement(2713612..2714232)
Genome browser
AA seq
206 aa
AA seq
DB search
MIGRIRGTLAEKQPPEILVDANGVGYEIHMPMTSFYQLPAVGEEVVVYTHFVVREDAQLL
FGFADKMERGLFRELIKANGVGPKLGLTILSGMSAGQFLSAVQNADVSALVSLPGIGKKT
AERLVVELKDRLAKFGKVQSIAIPPPSGDLLNTNTLVEVNDTREDAQSALVALGYKPAQA
SKLIDSVYKEGMESESLIREALKAAI
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgattggacgtattcgcggtacattagccgaaaagcagcccccagaaatattggtagat
gcaaatggggtaggttatgaaattcatatgccaatgaccagcttctatcaattaccagcg
gtaggtgaggaagtggtggtttatacccatttcgtcgtgcgagaagacgcgcaattatta
tttggttttgccgataaaatggagcgaggattattccgagagctaattaaagcaaacggt
gtgggccctaaattaggcttaaccatattatcgggtatgtccgcaggccaatttttgtca
gcggttcaaaatgcagatgtttcggcactagtaagtttaccgggtattggtaagaaaacc
gctgaaaggttagtggttgagttaaaagataggttagcgaagtttggcaaagtgcaaagt
attgctattccaccgccaagtggtgatttacttaataccaatacgttagtagaagtaaac
gatacgagagaagatgcccagagcgcgctagtggcactaggctataagcctgcgcaggcc
agtaaacttatcgatagtgtgtataaagaaggcatggaaagcgaatcgcttatacgtgaa
gcgttaaaagccgctatttga
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