KEGG   Alteromonas naphthalenivorans: ambt_14120
Entry
ambt_14120        CDS       T01513                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
alt  Alteromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:alt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:alt03400]
    ambt_14120
Enzymes [BR:alt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ambt_14120
    5.6.2.6  RNA 3'-5' helicase
     ambt_14120
DNA repair and recombination proteins [BR:alt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ambt_14120
SSDB
Motif
Pfam: DEAD Helicase_C Cas3-like_C_2 MotA_activ
Other DBs
NCBI-ProteinID: AEF04342
UniProt: F5ZEF1
LinkDB
Position
complement(3186112..3188316)
AA seq 734 aa
MIDAHEKLDFRVQQWIFKQGWDRLREIQCLAIDPILTGCTDVLISASTAAGKTEAFFLPA
ISAIAEDKRGVGILYISPLKALINDQDRRLESLADILDLQVTPWHGDSAQGRKSKLKRNP
SGIVLITPESLESLFIRDSGWVKSAFQNLKHIVIDEFHAFIGTERGHHLLSLLHRLEHLL
GRLKNPIPRTALSATLGELETVPLSLRPNKSLPCKIIKQTQSSASLKMQVKGYIETNTAV
GDAVRAEHLVCNDLYELCRGGNHLVFANSRSRTEILAAVLADMCESNAVPNEFFPHHGSL
SKEMRETLEARLQQERLPTTAICTMTLELGIDIGKVNSVVQVTAPHSIASLRQRMGRSGR
RGGASILRMLITENELTEQSSIVDQLRLELVQSLAMVRLLVANKWYEPADSSLLHFSTLL
HQILALTAQWGGIRADQIYSLLCKDGPFQHVTVAHFKCLLSHMGNTELITQLGSGELVLG
HAGEKITNHYSFYAVFKTPEEFRIVSGSKTLGTLPVDSLILEGQHIVFAGRRWVVELVDV
EKKVILVNRAKGGQPPKFGGAGMAIHDVVRQEMFKILCEGDYKIKVGEHRIEFADETAQS
LFQEAAKFFQTANLAKTNFIQQGNRTVILTWAGDKIVNTIVAVLISKGFAAGAFAGIIEI
EKADAQDVIDALKSFQTDGTISADQLAKSIPEKAIDKFDEYLPENLLLAGYAARAFDVLS
TKLKIKELLTDFVS
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgatagatgcacacgagaagctggatttccgtgtacagcagtggatttttaagcagggc
tgggatcgcctacgagaaattcaatgcctagcgatcgatcctatcttgaccggttgcact
gatgtgctcattagtgcttctacagcagcaggcaaaacggaagcattttttttacccgca
ataagtgctattgcagaggataagcggggcgtcgggatcttatatataagtcccctaaaa
gcactaataaacgatcaagatagaaggcttgaaagtctagcagatatactagacttacaa
gttacgccttggcacggtgatagtgctcaaggccgtaaatcaaaacttaaacgaaatcct
tctggtattgttttaataacacctgagtcattagagtcactatttatacgggatagtggt
tgggttaaatctgcttttcaaaatttaaaacatattgtaatagacgaatttcacgcattc
atagggactgaacgtggtcatcatttgttgagtttacttcaccgattagagcatttgctt
ggtcgcctaaaaaatcctatacccagaactgcattaagtgccactcttggcgaattagag
accgtaccactctctcttaggccaaataaatcattaccatgcaaaataattaagcaaacc
caatcttcggcttcgctaaaaatgcaggtcaagggctacattgagaccaatacagcagta
ggtgatgccgtgcgagctgagcatcttgtatgtaatgatttatatgaactttgccgaggt
ggtaaccatctagtctttgcgaatagcagaagtcgtactgaaatccttgcagcagtatta
gccgatatgtgtgagagtaacgctgtaccaaatgagttttttcctcatcatggttccctt
tcaaaggaaatgagagaaacattagaagctcggctacagcaggaaaggctcccaactact
gcaatttgtaccatgaccttggagcttggtattgatattgggaaagttaactcagttgtg
caagttaccgcgcctcattcgatagctagtttgagacaaagaatggggcggtcaggaaga
cgcggtggtgcaagtattctaaggatgctgattaccgagaacgaactgacagagcaatcc
agtattgtagatcagttacgtctggagctagttcagtcattagcgatggtcagattatta
gttgctaataagtggtatgaaccggctgactcctcactattgcatttctcgacacttctg
catcaaatattagcattaactgcccagtggggaggaataagagctgaccaaatatatagt
ttgctgtgtaaggatggcccgtttcagcatgttaccgtcgctcattttaaatgcttattg
tcccatatgggtaatactgaattaattactcagttaggtagtggagagcttgttttaggg
catgctggcgaaaaaataacgaatcattatagcttttacgctgtatttaaaacacctgaa
gaatttagaattgtttcaggcagcaaaacgctaggaacacttcctgtagatagcttgata
ttagaaggtcaacatatcgtttttgctggaagaaggtgggtggttgaattggttgatgtg
gaaaaaaaggtaatattagtcaaccgcgctaaaggaggccagccacctaaatttggcggc
gctggaatggcgattcatgatgtggttcgacaagaaatgtttaaaatactgtgtgagggc
gactacaaaataaaggttggcgaacaccgaatagagtttgcggatgaaactgcacagtca
ttgtttcaggaagcggctaaatttttccaaacagctaaccttgcaaaaactaattttatt
cagcaaggtaatagaacggtgatcctcacgtgggctggcgataaaattgtaaacactatc
gttgctgtactgatcagcaagggttttgctgctggagcatttgcaggaatcatcgaaatt
gaaaaggccgatgcgcaagatgtaatcgatgcacttaagagtttccagactgatggcaca
atatctgcggatcagttagctaagtcaattcctgaaaaggcgatcgataaatttgatgag
tatctaccagaaaatttgcttttggctggttatgccgcgagagcatttgatgtcttaagt
actaaattgaaaattaaagaactattaacagatttcgtctcatag

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