Alteromonas naphthalenivorans: ambt_17480
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Entry
ambt_17480 CDS
T01513
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt00300
Lysine biosynthesis
alt00470
D-Amino acid metabolism
alt01100
Metabolic pathways
alt01110
Biosynthesis of secondary metabolites
alt01120
Microbial metabolism in diverse environments
alt01230
Biosynthesis of amino acids
Module
alt_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ambt_17480 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ambt_17480 (dapF)
Enzymes [BR:
alt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ambt_17480 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
YNQ4_N
Motif
Other DBs
NCBI-ProteinID:
AEF04998
UniProt:
F5ZFE2
LinkDB
All DBs
Position
3946294..3947124
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AA seq
276 aa
AA seq
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MQVQFSKMHGLGNDFMVIDNVTQNVFFSKDKIQQLANRNFGIGFDQLLMVEPPYDPEQDF
HYRIFNADGSEVEQCGNGARCFARFVKQKGLINRNKIVVSTKAGKMVLYLEKDGQVTVNM
GKPEFEPAKIPLKANKQENTYILRVNDKTLFYGAVSMGNPHCVMEVEDVDTAPVKEIGPL
VERNERFPEGVNVGFMQIINESHIRLRVFERGSGETLACGSGACAAVAIGQIQGKLSKDV
RVDLPGGSLRIRWPGPDNVLKMTGPADHVYDGHINL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcagttttcaaaaatgcacggtctgggaaatgacttcatggtgattgataat
gtcacccagaacgtctttttctcgaaggacaaaatacagcagttagcaaatcgaaacttc
ggtatagggttcgatcaattgcttatggttgaaccgccttacgatcctgaacaagatttt
cactatcgcatatttaacgctgacggctctgaagttgaacaatgtggtaatggtgctcgt
tgctttgcgcgcttcgtaaagcaaaaagggctaattaaccgcaataaaattgtggtgagt
actaaagctgggaaaatggtgttgtacttggagaaagatggccaagttaccgtgaatatg
ggcaagcccgaattcgagccagctaaaattccactgaaagcgaacaaacaagaaaatacc
tatatattgcgcgtaaacgataaaaccttgttttacggtgccgtatctatgggtaacccg
cattgcgtcatggaagtggaagatgtagataccgcgcctgttaaagaaatagggcccctc
gttgaacgcaacgaacggttcccagaaggcgtgaatgtgggctttatgcagattattaat
gaatcgcacattcgattgcgtgtatttgaacgtggatcgggtgaaaccttggcatgcggc
agcggtgcatgcgcagcagttgcaattggtcagattcaaggtaaattaagcaaagatgtt
cgggtagatttgcccggcggcagtttacggatccgttggccaggcccagataatgtatta
aaaatgacagggcccgccgaccatgtgtacgacggacatataaatttatga
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