Alteromonas naphthalenivorans: ambt_18850
Help
Entry
ambt_18850 CDS
T01513
Name
(GenBank) regulatory protein, LysR:LysR, substrate-binding protein
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
alt
Alteromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alt03000
]
ambt_18850
Transcription factors [BR:
alt03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ambt_18850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_23
HTH_28
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AEF05263
UniProt:
F5Z630
LinkDB
All DBs
Position
4228532..4229446
Genome browser
AA seq
304 aa
AA seq
DB search
MHHLNYHHLYYFYLVAREGSIAQAAKLLHVTPQTVSGQLSTFENQIGYPLFDRVNKRLYL
NDKGKVSFQYASEIFHKGHQLAEILNAGDEVNTKEFVIGITNGIPKVLFYDFVHDTMRNF
ANVKYVIKEDSFDGLLKELAINAIDFIVADRGIAPGSQVNANSHFLGESALSFFAKAPLS
NSQTFPDCLNHMPLLIQGNTSGIHHALMSWLETEQLYPKIVAEFDDTALLKLFGSEDFGV
FCAPSAISNHVEAQYGVYCIGQAHSLNERYYAITGKSRVDFTITESIIKAARIILGYSQK
LIDA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacctcaactatcatcatctctactacttctatttagtggctcgcgaaggcagc
attgcgcaagccgctaaattacttcacgttactcctcaaaccgttagtgggcaactaagt
acttttgaaaatcaaattggttacccgcttttcgatagggttaataaacgcctatatttg
aatgataaaggaaaagtaagctttcaatatgccagtgagatctttcataaaggccatcag
ctagcagaaatactaaacgccggtgatgaagtaaatactaaagaatttgtgattggtatt
actaatggtatacctaaagtgcttttttatgacttcgttcatgacactatgcgcaatttt
gctaacgttaaatatgttattaaagaagatagcttcgatggattacttaaagaactcgca
attaatgcaattgatttcattgtggccgatagggggattgctccgggctcacaggtgaat
gctaacagtcactttcttggagaaagcgcgctaagcttttttgccaaagcgcccctttcc
aacagtcagacattccctgattgtttaaatcatatgccattgctgattcagggtaataca
tccggtattcaccacgcgttaatgagttggctagaaacagagcaactctacccaaagata
gtagcagagtttgatgacaccgcactgctaaagctatttggtagcgaggacttcggcgtg
ttttgtgcgccgtcggccatatcaaatcatgtggaagcacaatacggtgtgtattgtata
gggcaggctcactcgctgaatgaaaggtactatgcgattacggggaaaagtcgagtagat
tttactattactgaatctattattaaggcggcacgcattatcttaggttactcacaaaag
cttatagatgcttag
DBGET
integrated database retrieval system
