Alteromonas naphthalenivorans: ambt_19355
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Entry
ambt_19355 CDS
T01513
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ambt_19355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_19355
Enzymes [BR:
alt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ambt_19355
DNA repair and recombination proteins [BR:
alt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ambt_19355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
PriA-like_WH
AAA_30
Zot
Motif
Other DBs
NCBI-ProteinID:
AEF05362
UniProt:
F5ZFS1
LinkDB
All DBs
Position
complement(4358750..4360954)
Genome browser
AA seq
734 aa
AA seq
DB search
MVFIQVAVPVPLRQLFTYSHTDTLQPGVRVKVPFGPRQLVGIVVESGVDIDDTSKIKAII
EVVDSAPVIDESLRKMAHWLWQYYHHAPGEVIHAMLPVPLRKGEPATPSPAQYIQVTPEG
ADTDVKSLSRAPKQMSCLKAVQTTSIIASEARKHFSPAVVKALLDKALIELVDITPELTA
QAWLDTFEIGEKPVPDKEQGVAIAALNQQHGTFAISLLEGVTGSGKTEVYLQSIEPLLKA
GKQVLILVPEIGLTPQTVSRFEKRFNIPVGVLHSQLTDAARLSVWQRARAGELGIIIGTR
SAIFTPLKNPGMIIVDEEHDESFKQQDGLRYHARDLAAMRAKEHSIPLLLGSATPALETL
NNALNGRFAHLQLTRRAAGAQSTKQYLLDARDQPIHYGISEGLLTIMRQHVNAGNQILVF
VNRRGYAPALLCHHCGTTAMCKRCDRPYTVHKGQNRLQCHHCGATRSMPKECEACHSHEM
VTAGTGTEQVEEGLMKLFPDAKHVRIDSDTVRGKDKLHQTLDAINRQEHQILVGTQILSK
GHHFPHVTLVVVLDCDGALFSADFRAPEKLAQLVTQLAGRAGRASKPGEMWLQTHNPHHP
LLQDLVNNGYAHFARHALMERKASALPPYISQFVIRAEATESSSAYAFLQQARGVLSNSN
TANANSKGLVPQMSGPFPCLIEKRQGRFRFMLVCSHEKRAPLHNALRLALPYLQGLPQAA
KVRWSVDIDPTDFS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggtattcattcaggtggctgtacctgtgccgcttcgccagctatttacctattctcat
accgacactttacaaccgggtgtgcgggtaaaagtgcctttcgggccacgtcaactggta
ggcattgtggttgaatccggtgtagacatagatgataccagtaagataaaagccattatt
gaggtggtagatagcgcacctgttatcgacgaatcgctaagaaaaatggcgcattggtta
tggcagtattaccaccatgcgcctggggaagtgatacatgccatgcttcccgtaccactt
cgtaaaggtgagccagccacgccatcccccgcgcaatatattcaagtcacaccagaaggt
gctgataccgatgttaaaagtttaagccgtgctccaaagcaaatgagctgcttaaaagcg
gttcaaaccacatcaattattgctagcgaagcgcgtaagcatttttcacccgcagtagtg
aaagcgttattagataaagcacttattgagctcgtagacattacgcctgaacttactgca
caagcgtggttggataccttcgaaattggcgaaaagcccgtacctgataaagagcaaggg
gtcgcgatagcggcattaaaccagcaacatggcacctttgcgattagcttgcttgaaggg
gtgacaggtagcggtaaaaccgaagtgtatctgcaatctattgaacctttgcttaaagcc
ggtaaacaagtgcttattttagtgcctgaaattggtttaacgccgcaaaccgtttcgcgg
tttgaaaagcgcttcaatattcctgtaggcgtattgcactctcaattaacagacgccgcg
cgattatcggtatggcagcgggcaagggcaggcgaactcggtattatcattggtactcgc
tcagcgatttttacgccccttaaaaaccccggcatgatcatcgttgatgaagagcatgat
gagtcatttaaacaacaagacgggcttaggtatcacgcccgtgatttagcggctatgcgt
gccaaagagcacagtattcctttgttgctcggcagcgctaccccagcgcttgaaacgctt
aataacgcgttaaacggccgctttgcgcatttgcaactaacacggcgcgccgcaggggcg
caaagtaccaagcagtatttactagatgcccgagaccaacctattcattacggcatttca
gaaggcttgctgacaattatgcgccagcatgtaaatgcagggaaccagattctggttttt
gtgaatagacgaggttatgcccctgcgcttttatgtcatcactgtggcaccacggcaatg
tgtaagcgttgtgataggccttataccgtgcataaagggcaaaacaggctgcaatgccac
cactgtggtgctacccgttcaatgcccaaagagtgtgaagcttgccacagccatgaaatg
gtaacggcggggacgggcaccgagcaggtagaagaaggtttaatgaagctcttccccgat
gccaaacacgtgcgcatagacagtgatacggtaagaggaaaagacaagctacatcaaacc
ctcgacgctattaaccgccaagaacaccaaatactggtaggtacccaaattctatcgaaa
gggcatcattttcctcacgttacattggtggtggtgttagattgcgatggggcgctattt
agtgctgactttcgagctcctgaaaagctagcgcagctcgttacgcagcttgcagggcga
gcagggcgagccagtaaacccggagaaatgtggctgcaaacccacaatcctcaccaccct
ttattacaagatttagtgaacaacggctatgcccactttgctcgccatgcgttaatggag
cgaaaagcgtctgcattgccaccctatattagtcaatttgtgattcgggcagaggcaacc
gagagctcatcggcctatgcattcctgcagcaggctaggggcgtgctttcaaactcaaat
actgcaaacgcaaattctaagggcttagtaccgcaaatgagtggaccatttccctgttta
attgaaaaacgacaagggcgttttcgctttatgctggtgtgcagtcatgaaaaacgtgcg
ccgttacataacgcattgcggctagctctgccgtatttacaagggttaccgcaggcggca
aaagtacgttggtcggtagatatcgaccccaccgatttcagttag
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