Alteromonas naphthalenivorans: ambt_19420
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Entry
ambt_19420 CDS
T01513
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
alt
Alteromonas naphthalenivorans
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alt03021
]
ambt_19420
Transcription machinery [BR:
alt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ambt_19420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
HTH_25
HTH_11
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AEF05375
UniProt:
F5ZFT4
LinkDB
All DBs
Position
complement(4369736..4370590)
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AA seq
284 aa
AA seq
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MSNKLQSLALSVPHSGSIEGYVQAVSRIDMLTAEEERALAVRLREDEDLEAARKLVMSHL
RFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKAKKRLGWFTHEEVQTVASELGVSTKEVLQMEARMSSQ
DQAFDLSADEDETGNFAPVQFLEDKSTDVEMDVINNDWDTNASKRLYSAIKTLDDRSQDI
IETRWLADSKITLQDLADKYEVSAERVRQIEKNAMKKLQAAMVA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaattgcaatccctagcactatcagttcctcacagcggtagcattgaaggc
tacgtacaagctgtaagtcgtattgatatgctaactgcagaagaagagcgcgcattagcg
gtgcgtcttcgtgaagatgaagatttagaagcagcacgcaagctggttatgtctcatcta
cgctttgttgtgcatattgcaaaatcttattcaggatatggtttgccacaagctgacctt
atccaagaaggtaatattggtctaatgaaggcagttaagcgtttcgacccaacagtgggc
gttcgtttggtttcttttgccgtacattggatcaaagctgaaattcatgagttcgtactc
aagaactggcgtattgttaaagttgctaccacaaaagcgcaacgtaaattgttcttcaac
ttacgcaaagcgaaaaaacgtcttggttggtttacccacgaagaagtgcaaacggtagcc
agcgagctgggtgtgagtacgaaagaagtgcttcaaatggaagcgcgaatgagcagccaa
gatcaagcattcgatctttctgctgacgaggacgaaacgggcaactttgcaccggttcaa
tttcttgaagataaatcaactgatgttgagatggacgttattaataacgattgggatact
aatgcgagcaagcgtttgtactcagccattaagacgctagatgacagaagccaagatatt
atcgagactcgttggttggctgacagcaaaattacacttcaagatcttgctgataagtac
gaagtatctgctgaacgtgttcgtcaaattgaaaagaacgcgatgaaaaagcttcaagct
gccatggttgcgtaa
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