Alteromonas naphthalenivorans: ambt_20565
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Entry
ambt_20565 CDS
T01513
Name
(GenBank) ada regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ambt_20565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alt03000
]
ambt_20565
03400 DNA repair and recombination proteins [BR:
alt03400
]
ambt_20565
Enzymes [BR:
alt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ambt_20565
Transcription factors [BR:
alt03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ambt_20565
DNA repair and recombination proteins [BR:
alt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ambt_20565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AEF05604
UniProt:
F5Z6U1
LinkDB
All DBs
Position
complement(4625645..4627057)
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AA seq
470 aa
AA seq
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MNTDIKDSAHVDNEHRETYAKARVSRDARFDGRFFVAVKTTGIFCRPICPAKLPDEKNVA
YYNHAAKAMSDGFRPCLRCRPDSAPSSFAWLGVGTTVTRALTLLSDIPVQSISTISSRLG
ISERHLNKLMVSHTGLSPKQYQDLQRVLFAKQLLQQSTMKLTDIAFSAGYASTRQLQRAV
QTYCKKTPTELRSKRHTALPEISLRLHFRPPYHWQQVREFLALRAIRGVEKVSEDTYCRY
ISVKGELGFISATFNESANGFDVKMRLPNLAYVYKTVEQIKQLLDLHAAPELIEKSLLAA
GLPDNLLTKGLRLPGTWTVFESGCRAIVGQQVSVKAAINQAGLLAQHLGAVGTEEPVEQN
QRYCFPEPEAVANSELTFLRMPNARKLALRDFAALFCNGNQPTHDEILSIKGVGQWTLDY
LKMRGERNPDVYLSGDLIVRKMAEKYPVLPQKAAPWQSYLTLQLWQLSNG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgacataaaagattcagcgcacgtagacaatgagcaccgcgaaacttacgct
aaagctagggtaagtagagatgcccgctttgatggccgcttctttgtggcggtgaaaacc
acgggcattttctgtcggccaatttgccctgcgaaattgccagatgaaaagaacgtggct
tactataaccacgctgctaaagccatgagcgatggctttcgtccctgtttacgatgcagg
cccgacagtgcaccgtcttcttttgcgtggttaggggtaggcacaacggtaacaagagcg
ctaacgctattaagtgatatacccgtgcagtctatctccaccatttcaagccggttgggt
attagtgagcgtcacttaaataaactcatggtgtcgcatacggggttgtcgcccaaacaa
tatcaagatttacaaagggtgctgtttgctaagcagctactacagcaatctaccatgaag
cttactgacatcgcgtttagcgccggatatgcttctacaaggcagcttcagcgagcagtg
caaacctattgcaaaaaaacgcctaccgaattacgaagcaaacgccatactgctttgcct
gaaatatctcttaggttgcacttcaggccaccttaccactggcagcaagtacgtgaattt
cttgctttgcgcgctattcgtggcgtagaaaaggtgtctgaagatacctactgccgttat
atcagcgtaaagggtgaattggggtttattagcgcgacttttaacgagagcgcaaatggc
ttcgatgtaaaaatgcgtttgccaaatttggcttacgtgtataaaacggttgaacaaatc
aagcagctgctcgatttacatgcagccccggagttaatagaaaaatcgctattagcagcg
ggtttgcctgataatcttcttactaaagggttgcgacttcctggtacatggactgtgttt
gaaagtgggtgcagagcgattgttgggcagcaagtcagtgtgaaagccgcgattaaccaa
gctgggctgcttgcacagcatttaggggcggtaggcactgaggaacccgtcgagcaaaac
caacgttattgttttcctgaacccgaagcggttgccaatagtgagttaacttttttgcgt
atgcctaacgcccgtaagcttgcacttcgtgattttgcggctttgttttgtaatggtaac
cagcctactcatgatgaaatattgtcaatcaaaggggttggtcaatggaccttagattac
cttaagatgcgaggtgaacgtaaccctgatgtgtacttatctggcgaccttattgtaaga
aaaatggctgagaaatatccggtgttgccgcaaaaggctgcgccatggcaaagttactta
acactacagctgtggcagttgagtaatggttaa
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