Alteromonas naphthalenivorans: ambt_21010
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Entry
ambt_21010 CDS
T01513
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
alt
Alteromonas naphthalenivorans
Pathway
alt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ambt_21010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alt03019
]
ambt_21010
03110 Chaperones and folding catalysts [BR:
alt03110
]
ambt_21010
03029 Mitochondrial biogenesis [BR:
alt03029
]
ambt_21010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alt04147
]
ambt_21010
Enzymes [BR:
alt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ambt_21010
Messenger RNA biogenesis [BR:
alt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ambt_21010
Chaperones and folding catalysts [BR:
alt03110
]
Heat shock proteins
HSP60 / Chaperonin
ambt_21010
Mitochondrial biogenesis [BR:
alt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ambt_21010
Exosome [BR:
alt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ambt_21010
Exosomal proteins of other body fluids (saliva and urine)
ambt_21010
Exosomal proteins of breast cancer cells
ambt_21010
Exosomal proteins of colorectal cancer cells
ambt_21010
Exosomal proteins of bladder cancer cells
ambt_21010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEF05693
UniProt:
F5Z730
LinkDB
All DBs
Position
complement(4713355..4714995)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVRFGNDARTKMLKGVNTLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIITEGHKSVAAGMNPMDLKRGI
DKAVIAAVEELKALSTDCADSKSIAQVGTISANSDAEVGDIIAQAMEKVGKEGVITVEEG
QALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDSPFILLVDKKISNIRELLPTLEGV
AKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLDLEKVELEDLGTAKRVVINKDNTTIVDGNGDEEAIEGRCAQIKGQIEDSSSDY
DKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALV
RAAAKLASLTGENEDQTVGIKLALRAMEAPLRQIASNAGAEASVVVNEVKNGDGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIASLMITTEAMIADIPQDEAAPAMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtacgttttggtaacgacgctcgtacaaaaatgcttaaaggcgta
aacacgctagcaaacgcagtgaaagttacactaggtcctaaaggccgtaacgtagtacta
gataagtctttcggcgctcctaccatcactaaagatggtgtatctgtagccaaagaaatc
gaacttgaagacaagtttgagaacatgggcgcgcagatggttaaagaagttgcgtctaaa
gcgaatgacgaagcgggtgacggtacaactactgcaactgttttagcacaagctattatc
actgaaggtcacaagtctgttgctgcaggcatgaacccaatggatcttaagcgtggtatc
gacaaagcagttattgctgcggttgaagagcttaaagccctatctactgattgtgctgac
agcaagtcaattgctcaggttggtactatctctgcaaactctgatgcagaagttggcgac
atcattgctcaagcaatggaaaaagtaggtaaggaaggcgtaattactgttgaagaaggt
caagcacttcaaaacgaacttgacgttgttgaaggtatgcagttcgaccgcggttaccta
tctccttacttcattaacaaccaagagaacggcactgttgaactagacagccctttcatc
ctattggttgataagaaaatttctaacatccgtgagttgcttcctacccttgaaggcgta
gcaaaagcaggtaagccactgatgattattgctgaagatgttgaaggcgaagccttagct
acactagtagtaaacaacatgcgcggtattgttaaagttgctgctgttaaagcacctggc
tttggtgaccgtcgtaaagcaatgcttcaagacatcgctattcttactggtggtacggtt
atctctgaagagattggtctagaccttgaaaaagtagagctagaagaccttggtaccgct
aagcgcgtagttatcaacaaagacaatactactattgttgatggtaacggcgacgaagaa
gcgatagaaggccgttgtgctcaaattaaaggtcaaattgaagactcttcttcagactac
gacaaagaaaagcttcaagagcgtttagctaagctttctggcggtgttgcagtaattaaa
gttggtgctgctaccgaagtagaaatgaaagagaagaaagaccgcgttgaagatgcactt
catgcaactcgcgccgcggttgaagaaggcgtagtacctggtggtggtgtggcgctagtt
cgtgcagcagctaagcttgctagcctaactggcgaaaacgaagaccaaactgtaggtatt
aagcttgcactacgtgcaatggaagcgcctttacgtcaaatcgctagcaacgccggtgca
gaagcatctgttgtggttaacgaagtgaaaaatggcgacggtaactacggttacaatgcg
ggcaacgacacgtacggcgacatgctagagatgggtattcttgacccaactaaagtaacg
cgctctgcactacagttcgcagcatcaatcgcttcacttatgattacaactgaagccatg
attgcagatatacctcaagacgaagcagcgcctgcaatgcctgatatgggcggcatgggt
ggaatgggcggcatgatgtaa
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integrated database retrieval system
