Alteromonas sp. BL110: D1814_15785
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Entry
D1814_15785 CDS
T11343
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
alta Alteromonas sp. BL110
Pathway
alta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D1814_15785 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alta03400
]
D1814_15785 (recB)
Enzymes [BR:
alta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D1814_15785 (recB)
DNA repair and recombination proteins [BR:
alta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D1814_15785 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_11
DUF3067
ParB
SpecificRecomb
Motif
Other DBs
NCBI-ProteinID:
AXT40039
LinkDB
All DBs
Position
3656087..3659944
Genome browser
AA seq
1285 aa
AA seq
DB search
MSQNSVSSENYENKQTHTEAQLLDVVAMPLKGRHLIEASAGTGKTFNITRLYLRLLLEKK
LNVKEILVMTFTKAATEEIKGRIAATLREALLIWQQAKDNGNEIDASCDPVYQSLFNSCD
LDESLALLKAAQLELDEASVFTIHGFCQHVITQLAFNSGFAMSLNLGNDTSDLYLQAAED
FIRKISKSEDDFRLLAESGWHTPESLLREFSVSIKSTLTPLMLTEEDIEAAFDKQLDDAP
NTSLAYVKSLLQSVEENEGLIIEQLIKTPAHKKERPQELAALKAWLGSCINEQQYYLAPP
EAEAFVKGNRYARNSSGVKEILTPIKEFAGALKKAFGEKDKALGKVPVFKLVIEAITFIK
KRVEKQKKQLGVIDFDDLIRMLADEVIKPNNTLVPELRKKFPVALIDEFQDTDAKQYAIL
DAVYPNLAEANESALLMIGDPKQAIYRFRGGDIFTYLKAGRQADYRWVMNTNWRSVEGMV
RAYNRLFYGAPVASGKPTDVFGFGINYNPVEFTPKAAAAKTPLVDPAEQIGVMKRSAMNY
VSMCLEEKENTNIMRRKMAQWIAQEIYRLLNEAHFKAADGHTTPVKPQDIAILVKDRTEA
GAIKNVLQQKGLACVYLSDRSNLFASAEAKDVLRLLNGIWHANDTSKVASSLASPLWGYS
ANTLIELLYHEDDAQWDAAIDKVLALRDMWLQKGCMSVLLHLMQDSYQPHADSVERALTN
YQHLAEVLEKASTTHQRPEQLLDWLNKQIHKPESDEELTLRLESDSQLIRLITQHGSKGL
EYPIVFVPYATGYKDASKNGKATSQIFTYYDEEKHDLQMQLGQTPQAIARVQRESEAEDM
RLAYVAVTRAAHRCYMGVVPLANNEKSALARALGVSGDSGSNDWTSVLSRVAQEDASHTS
HIDGDEFDEVYSVFEQEDELPKLSVLQFSGTASEEWRLYSFSAMSRLTTVSTGANTPVVE
PLGQTLPSVPVIQTIRDEEVYAADSPVGGEALFGVSGTDPSFSAATTTSKSDLRFTLEKG
ASAGNLLHDILENNDFSAPEWEETGKELVKRFGLDEKRTPLLYDWLEEALQTPLYPKMQL
SMSDLPLAQTLREAEFYFPMNDTQWAQLRDVLSRHRQSVADSIGGKVDAAPQLITAKLQG
MMHGFIDLIFEYDGQFFVADYKSTWLGDTLDCYLPAALFHNNQHHLYDLQYLIYCLALHR
YLKNTLPDYDPDVHFGGVYYLYLRGMHPENERGEGVFYTDIPSSFLMQIDSIFERGGNIQ
QSDNSKNAGTTQQPSGQQQFSFDDE
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaattcagtatcctctgaaaattacgagaacaagcaaacccatactgaagca
caattgcttgacgttgtggctatgccgctaaaggggcgacaccttattgaagcgagcgca
ggtacaggtaaaacctttaacattacgcggttgtacctgcgcttgctgttagaaaaaaag
cttaacgttaaagaaatattggtgatgaccttcaccaaagccgcgaccgaagaaattaag
gggcggattgcggcgacgttaagagaggcattgcttatttggcagcaagccaaagacaat
gggaacgaaatagacgctagctgcgacccggtttatcagagcttatttaatagctgcgat
cttgatgagagtttggccctcttgaaagctgcgcagctggaactcgatgaggcatcggtg
ttcactatccacggtttttgtcagcatgttattactcaactggcgtttaacagtggcttt
gctatgtcgctcaacttgggtaacgatactagcgatttataccttcaagctgccgaagat
ttcattcgaaaaataagtaaaagcgaggacgatttcaggctattggcagagtctggctgg
catacacctgaaagtctgctgcgtgaatttagcgtaagcataaaaagtactctgacccct
ttgatgctaaccgaggaagatattgaagcggcttttgataaacagttggatgacgcgcca
aacacgtctttagcctatgtgaaatcgttactgcaaagtgtggaagaaaacgaagggtta
atcatagagcaacttattaaaacacctgcgcataaaaaagaaaggccacaagaattagca
gcgctaaaggcttggttaggctcttgcattaatgagcagcagtattatctggcaccccct
gaagcagaagcttttgttaaggggaatcgatatgctcgaaattcctcaggcgtaaaagag
atcttaacgccaattaaggaatttgctggtgcccttaaaaaagcctttggcgagaaagac
aaagcacttggtaaagtacctgttttcaagctggttatcgaagctattacctttattaaa
aagcgggttgaaaagcagaaaaagcagcttggtgttatcgatttcgatgaccttattcgc
atgttagccgatgaggttataaaaccaaacaatacccttgtgccagaacttcgcaagaag
ttcccagtcgcactaatcgatgagtttcaggacactgatgctaagcaatacgctatctta
gatgcggtttatcctaatttagctgaagctaatgaaagtgcgcttctaatgataggtgat
ccgaagcaggctatttatcgctttcgaggaggtgacatttttacctatttgaaagcgggt
aggcaggcggattaccgctgggtgatgaacaccaactggcgctctgtagaaggtatggta
agggcctacaaccgattattttatggtgcgccagtggcatcgggcaagcccactgatgta
tttggcttcggcatcaattacaaccctgttgaatttactcctaaagcagctgcggctaag
acacccttggtagaccccgctgagcaaattggtgtaatgaaacgcagcgcaatgaattac
gtgagcatgtgtttagaggagaaagaaaacactaacattatgcgccgtaaaatggcgcag
tggattgcgcaagagatttatcgcttgttgaatgaagcgcattttaaagcggcggacggt
cacacaacgccagttaagccccaagatatcgcaattctggtcaaagacagaactgaagcg
ggcgccatcaaaaatgtattacagcaaaaagggctggcctgtgtttatttaagtgatcga
agtaacttatttgccagcgctgaggcgaaagacgtgcttagactgcttaatggtatttgg
catgcgaacgacacaagtaaagttgcctcaagtttggcttcaccgctttggggctatagc
gcaaatactcttatcgaactgctatatcacgaagacgacgctcagtgggatgccgctatc
gataaagtactggcgctgcgtgatatgtggctgcaaaaaggttgtatgagcgtactgcta
catctaatgcaagacagttatcaaccccatgccgacagtgtagaacgggcattaactaac
tatcagcatttagcggaagtgttggaaaaggctagcacaacacaccagcgccctgagcaa
ctactagattggttgaataagcaaatccacaaaccggaaagtgatgaagaactaacgctg
cgccttgagagtgatagtcagcttattcgccttattactcagcatggctcaaaaggcctt
gagtatccaatcgtttttgtgccctatgccacgggctataaagacgcgtcaaaaaatgga
aaggcgacatcgcaaatctttacttattacgacgaagagaagcatgacttacagatgcag
ctagggcagacgccacaagccatagctcgggttcagcgtgaaagcgaagcggaagatatg
cgtttggcgtatgtggcggtaactcgggcagcgcaccgctgctacatgggggttgtgcct
ctggctaataatgaaaaaagcgcactggcacgagctttaggtgtcagtggtgacagcggc
agcaatgattggactagtgtattaagccgggttgcccaagaagacgcctctcatacaagc
catatcgacggcgacgagttcgacgaagtgtattcagtctttgagcaagaagacgagctg
ccaaagcttagcgtgttgcaatttagcggcacggcgagcgaagaatggcggctgtattca
ttttctgctatgagccgcctaactacggtgagtacgggcgcaaacacacccgtagtggag
ccattaggtcaaacccttccgagtgtgcccgtaattcaaactattcgtgacgaagaggtt
tacgccgcagattcacctgtggggggagaagcgctgtttggtgtaagtggtacagatcct
tcgtttagcgctgcgacgacaaccagtaaaagtgacttacgcttcacgttagagaaaggt
gcaagcgcaggtaatttactgcacgatattcttgaaaacaatgattttagtgcgcccgaa
tgggaagaaactggcaaagagctcgtaaaacgctttggcctagatgaaaagcgtacaccg
ctactttacgactggctagaagaagctttgcagacgcccctgtatcctaaaatgcaatta
agcatgagtgatttaccgttagcgcaaaccctgcgcgaagcggagttctactttcccatg
aacgatacccaatgggctcaacttcgtgatgttctttcccgccaccgccaatctgtagct
gattccattggtggtaaggttgatgctgcgcctcagctaatcacggcgaaactgcaggga
atgatgcacggttttattgacttgatttttgaatatgatggtcagttttttgttgcggat
tacaaatcgacctggcttggagatacgttagattgctacttacccgctgcgctgtttcat
aacaatcagcatcacctttacgacctccaatacttaatttactgcttagcgctacaccgc
tatttaaaaaacaccctgcctgattacgaccctgatgttcatttcggtggtgtgtattat
ctatatttacgcggcatgcaccccgaaaacgaacggggtgaaggggtattctataccgat
attccttcgtcttttctcatgcaaatagattcgatatttgaaagaggtggcaatattcag
caaagcgacaattcgaaaaatgcaggcactactcaacagccttcaggtcagcagcagttt
agtttcgatgacgagtag
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