Alteromonas sp. BL110: D1814_15790
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Entry
D1814_15790 CDS
T11343
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
alta Alteromonas sp. BL110
Pathway
alta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D1814_15790 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alta03400
]
D1814_15790 (recD)
Enzymes [BR:
alta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D1814_15790 (recD)
DNA repair and recombination proteins [BR:
alta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D1814_15790 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
AAA_22
SLFN-g3_helicase
UvrD-helicase
SH3_13
UvrD_C
RecD_N
AAA_16
nSTAND3
DEAD
ResIII
PhoH
Terminase_6N
AAA_12
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AXT40040
LinkDB
All DBs
Position
3659976..3662174
Genome browser
AA seq
732 aa
AA seq
DB search
MNNNQHSVSSFFDNLFGIEAIDKFVAKEFGFIDEIAQEERFIWAGLLAYLSYMQRNGHSC
IYLKDIAGTTLFKEIDTEQAIGSTADVQESESASSNHNSQAFIEQTEPEKVPQTGVELPQ
LTPLLKIVKSALENEQVAQLFVYKNGRLYSRRYYGFEQEVARNIVDRAAITPLTEEATEK
VKQLWPAIFPTETTDQQDWQQIAVAKSLMQRFCVINGGPGTGKTYTVLRLLLALQACDKD
LNIVLAAPTGKAQQRMTESIVNSIEALRGKVDDTALDNVPTAAVTLHRLLGLREHGVSTK
YNQHNPLAADVLIVDEASMVDLALMTRIVRALPDHARLYFIGDADQLPAVELGNVLEQLV
SDTTSFVAEENASPSSENSLHSPNDPLSLGGVPSLMRQHIATLCPHLPMLPVNERAKSYV
ATLQAPQRFKGQVAKVATAIQQGNAGGALAAIAEKGNENSKTANLASHIASNLDSNNKPR
LKDGVCLWPEDEVSSRDLHELAKESFFPIFDADNAGEALNRLNYVRWLTPVRKGAMGVEG
LNSLVFDAIKHKIKRREGHFYQGQPIMIVKNHHPQRLSNGEVGVIWPDSTGKLYAWFYQD
AKSPDQQASSGTGENATGVQHQMQKQALRSISLSRVPQFETVYAMTIHKSQGSEFNHVVL
MLPKPDSDKAANLFHRGLVYTGLTRAKGGCLIISDNTTFSHMVQRVDKRYSGLSEAISLH
IESTSNATTEIE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaatcaacattctgtatcgtcgttttttgataacttgtttggcatcgaagct
atcgacaaatttgtcgcaaaagaatttggctttattgatgaaattgcgcaagaagagagg
tttatctgggctgggttactggcgtatttgtcgtacatgcagcgtaacgggcatagctgt
atctatcttaaagatatagcggggacaacccttttcaaagaaatagacaccgaacaagcg
attggttcgacggccgacgtgcaagaaagcgaaagcgcatcatcgaatcacaactcgcaa
gcgtttatagaacaaacagagcccgaaaaagtcccccaaacgggtgtagagctacctcag
cttacgcctttactaaaaattgtaaaaagcgcgctggaaaacgaacaagttgctcagcta
tttgtttataaaaacggtaggctgtatagccgacgctattatgggtttgaacaagaagtg
gcgcgaaacatagtggaccgggcggcgattacaccccttacagaagaagcaactgaaaaa
gtaaagcaactgtggcccgctatattccctaccgaaactacagatcaacaagattggcag
caaattgctgttgctaaaagtttgatgcagcggttttgtgtcataaacggcgggcctggc
acgggtaaaacctataccgtattacggctattactggcgttacaggcgtgtgacaaagac
ttgaatattgtattagccgccccgactggtaaggctcaacagcgtatgaccgagtctata
gtcaatagtattgaagcgcttcgcggtaaggttgacgatactgcgcttgataacgtacct
acagccgctgtaacgctgcataggttattagggttacgagaacacggtgtatcgaccaag
tacaatcaacacaacccattggcagcagatgtactcatcgtcgatgaagcgagtatggtc
gatttagcgttaatgacgcgcattgttcgtgcattgccggaccatgcacgactctatttt
attggtgatgccgaccagcttccagccgttgagcttggcaatgtgctagagcagctcgtt
agtgatacaacaagcttcgtcgcagaagagaatgcatcgccgagtagtgaaaatagccta
cacagtcctaacgacccgctttcattgggaggcgtaccatcgttaatgcgccaacatatt
gctacactgtgtcctcatcttcctatgttacctgttaatgaacgagcaaaaagttacgtg
gcaacactgcaggcgccgcagcgttttaaaggacaagttgcaaaagtggcaacggccata
cagcaaggtaacgctggtggtgcgctcgctgccatcgccgaaaagggcaatgagaatagt
aaaaccgctaacttagcttcacacatagcctcaaacttagattcaaataataagccacgc
ttaaaagatggcgtgtgtttgtggccagaagatgaagttagcagtcgtgatttacatgag
ttagctaaagaaagcttcttccccatttttgatgccgataatgctggagaagcgcttaat
cgcctaaactatgttaggtggctcacgccggtgcgcaagggtgcaatgggagttgagggc
ctaaatagcttggtgttcgatgccattaagcataaaattaagaggcgagaagggcacttc
tatcaaggtcagcccataatgattgtaaagaatcatcatccacagcggctatcgaacggt
gaagtaggcgtaatttggcctgatagcacgggtaagctgtatgcatggttttaccaagat
gccaaaagtccagaccaacaagcctcgtcaggtacgggcgagaatgctactggtgtacaa
caccaaatgcaaaaacaagcgttacgcagtatatcgttatcaagagtgccacagtttgaa
actgtatatgccatgaccattcacaaatctcaaggctctgagtttaatcacgttgtgctc
atgctgcccaaacctgatagcgataaagccgccaacctattccatcggggtctagtgtat
accggcttaacccgtgcgaaaggcggttgtttgattatttcagacaacacgacatttagc
catatggttcagcgtgtagataagcgctattcagggttgtcagaagcaataagcctgcac
atagagagcacatcaaacgcgaccacagaaatcgagtag
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