Alteromonas sp. BL110: D1814_17900
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Entry
D1814_17900 CDS
T11343
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
alta Alteromonas sp. BL110
Brite
KEGG Orthology (KO) [BR:
alta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alta03009
]
D1814_17900 (rimO)
Enzymes [BR:
alta01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D1814_17900 (rimO)
Ribosome biogenesis [BR:
alta03009
]
Prokaryotic type
ribosomal protein modification factors
D1814_17900 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
Methyltransf_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXT40423
LinkDB
All DBs
Position
4120076..4121524
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AA seq
482 aa
AA seq
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MTVETFNPNKVVNKTTTLETPVKVLSDNKPSQQSNGSRIGFVSLGCPKNLVDSERILTQL
RTEGYDVVPTYNDADLVIVNTCGFIDAAVEESLDTIGEALKENGKVIVTGCLGVKEDEIR
ELHPNVLAITGPHAYETVVEQVHDHLPKPQHNPFEDLIPDHGVKLTPRHYAYLKISEGCN
HRCTFCIIPSMRGDLVSRPVGNVLDEAKRLKEAGVKELLVISQDTSAYGVDVKHRTGFWN
GMPVKAHMQQLCEKLGEMGIWVRLHYVYPYPHVDDLIPLMNEGKILPYLDIPFQHANKRI
LKLMKRPGSAERVLERVKKWREQCPSLVIRSTFIVGFPGETEEEFEELLDFLREAQLDRV
GAFAYSPVEGARANDLPDPVPEDIKQARLARFMEVQGEISQARLQARIGNEYQVVIDSVD
AEGAVGRTYADAPEVDGLVHLNGVYDVKPGDRVWAEVIHANEHDVWAVLSDDQDEEDTDS
VD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagaaacgtttaatccaaacaaagtagtaaataaaaccaccacgctagaaacg
ccagtgaaggtattaagtgataacaaaccttcgcaacaaagcaatggcagcagaattggt
tttgttagcttaggttgccctaagaacttagttgattctgagcgtattcttactcaactt
cgcaccgaaggttatgacgtcgtccctacctataacgatgcagatctcgttatcgttaac
acttgtggcttcattgatgctgcagttgaagagtcgctagataccattggtgaagcactt
aaagaaaacggtaaagttatcgtgactggctgtctaggtgttaaagaggacgaaattaga
gagcttcacccgaacgtgttagcgattactggccctcacgcctacgaaacggtagttgaa
caagtacatgatcatcttcctaagccacagcacaatccatttgaagatctcattcctgac
catggtgtgaaattaacgccgcgtcactatgcttatctgaagatttcagaaggctgcaat
catcgctgtacgttctgcattattccttctatgcgaggcgacttagtcagccgcccagta
ggtaacgtgcttgatgaggccaagcgtttaaaagaagccggcgtgaaagagcttttggtt
atatcacaagataccagcgcctatggtgttgatgttaagcacagaacaggtttctggaac
ggtatgccggttaaagcacacatgcagcaactgtgtgaaaagcttggcgaaatgggtatc
tgggtccgtttacactatgtatacccctacccgcacgtcgatgaccttattccgcttatg
aacgaaggtaaaattcttccgtacttggatatcccctttcaacacgccaataaacgcatc
cttaaattgatgaagcgtccaggcagtgccgagcgtgttcttgaacgcgttaagaagtgg
cgtgagcagtgcccgtcgctggtcattcgttcaacattcatcgtcggctttccgggcgaa
acagaagaagagtttgaagaattattggatttccttcgcgaggcgcagcttgatcgcgtt
ggcgcatttgcatattcaccagttgaaggggcaagagcaaacgatctgcctgacccagta
ccagaagatataaagcaagcccgccttgcacgctttatggaagtacagggtgaaatcagc
caagctcgtttacaagcgagaattggcaacgaatatcaagtagtcatcgacagtgttgat
gcagaaggtgctgtaggtcgtacttacgcagatgcaccagaagttgacggcctggttcac
ttaaacggtgtttatgatgtaaaaccaggcgatcgtgtatgggcagaagtaattcatgct
aacgagcacgacgtgtgggctgtactgtctgatgatcaagacgaagaagatactgattca
gtagactaa
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