Alteromonas sp. B31-7: IUA53_01945
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Entry
IUA53_01945 CDS
T11045
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
altb Alteromonas sp. B31-7
Brite
KEGG Orthology (KO) [BR:
altb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
altb03009
]
IUA53_01945 (dbpA)
Enzymes [BR:
altb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IUA53_01945 (dbpA)
Ribosome biogenesis [BR:
altb03009
]
Prokaryotic type
rRNA helicases
IUA53_01945 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
adh_short
Cas3-like_C_2
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QPL50440
UniProt:
A0A7T0RMK9
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All DBs
Position
448285..449664
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AA seq
459 aa
AA seq
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MTVETIKHLDINPDIQRALDAQGIYTLSPIQAQSLPHALAGKDVIGQAQTGSGKTLCFVI
PALEKIDQSNFSVQVVMLCPTRELADQVAQQCRNAAKQIGNIKVLTLCGGQPMGPQIQSL
KHGAHIIVGTPGRVMDHVERRRLDLSNVTLRVLDEADRMLDMGFEEALDVIFSPMPNTVQ
TLLFSATFTEQIERIAEQNLTDPVTCKVEAAINKPAITQLGYKVLPHTRIQTLKALLTHY
QPKNAIVFCNRRVQVNEVVEELTEEGFSAAGLQGDMEQIARTAVLMQFASDALQVLVATD
VAARGLDIDDIECVINYTVSEEPETHIHRIGRTARAGAKGTAITLVGDEEEHFLRKIEVL
QESDIEMKGAQALRFHKNRIVLPDFTCISLGAGKKQKLRPGDLVGALTKDAGIPGDDVGK
IAVQNSMSFVALKTRSVKRAMALFRDGKIKGKRVRARKL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagaaaccattaagcacttagatatcaacccagacattcaacgtgctttggat
gcgcagggcatttatacgctttcgcctatccaagcacaatctttaccccatgccttggca
ggtaaagacgtcatagggcaggcacaaacaggaagtggtaaaaccctttgctttgtcata
cctgccttagaaaaaattgaccagagcaacttttctgttcaagttgtcatgttatgtcca
acccgagaactggctgatcaagtggcgcagcagtgccgcaacgcggccaagcaaattggc
aatataaaagtccttaccctgtgcgggggccaacctatggggccgcagatccagtcgctc
aaacacggtgctcatattattgtgggtacgccagggcgggtgatggaccatgtagaacgt
cgccgattagatttatccaatgtaacgttaagggtactagacgaagccgatcgtatgttg
gatatgggctttgaagaggcgttagacgtcatattttcgccgatgccaaacacggtacaa
accttacttttctcggctacctttaccgagcaaattgaacgcattgctgagcaaaactta
actgacccggtaacctgcaaggtagaggccgcaatcaacaagcctgctattacgcaactg
gggtataaagtacttcctcatacacgaattcaaacactaaaagccctgttgacccattac
cagcctaagaatgccattgtgttttgtaaccgaagggtgcaagtcaacgaagtggtagag
gagcttacagaggaaggctttagtgcggcgggcttgcaaggcgacatggagcagatagcg
cgcactgccgtgttaatgcaatttgctagcgatgcattacaggtgctagtggcaaccgac
gtggcggctagagggctagacattgacgacatagaatgtgtcattaattacaccgtgagt
gaagagccggaaacccatattcatcgaattggacgtactgcccgtgcgggcgcgaaaggc
acggccattacccttgtaggtgatgaagaggagcactttttgcgaaaaatcgaagtgctt
caggaaagcgatatcgagatgaaaggcgcacaagcattgcgttttcacaaaaaccgtatt
gtattacctgattttacctgtatttcattaggcgcgggtaaaaagcaaaaactacgccct
ggcgacttagtgggagcattaaccaaagatgccggtattccaggcgatgacgtgggtaaa
attgcggtgcaaaatagcatgagttttgtggcgttaaaaacacgcagtgtaaaacgcgct
atggccttgtttagagacggcaaaattaaaggcaagcgggttcgtgctcgcaagctttag
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