Alteromonas sp. B31-7: IUA53_06275
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Entry
IUA53_06275 CDS
T11045
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
altb Alteromonas sp. B31-7
Pathway
altb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
altb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IUA53_06275 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altb03400
]
IUA53_06275 (xseA)
Enzymes [BR:
altb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
IUA53_06275 (xseA)
DNA repair and recombination proteins [BR:
altb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
IUA53_06275 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
CYP38_PsbQ-like
Nab1
Motif
Other DBs
NCBI-ProteinID:
QPL51217
LinkDB
All DBs
Position
complement(1492272..1493627)
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AA seq
451 aa
AA seq
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MFTNSPSTSRQILTVTKLNRLARTVLEGEIGLIWLSAEISNFVCAASGHWYFTLKDNKAQ
VKAAMFKGANRNVRMRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQAFEAL
KARLNTEGLFATHRKQPLPEAINRIGVITSASGAALHDILSVLKRRSPQTEVIIYPSMVQ
GESAPSQLINALTVANQRNEVDVILLSRGGGALEDLWCFNDETLARHIAQSTLPVVSAVG
HEIDFTIADFVADVRAPTPSAAAEILSQDTRALYHAVTQNRQRLVRAMQTQIQRAQQGLT
LRQQKLLSVHPQRRIQHQWQSLDRLQLRLKHAMANTLSHVAKTLDDKTQKLAKQSPLLRI
ERGQNKLNQLDKALTSAIRNQLKDKQQLLGAKAGLLHSVSPLSTLSRGYSITLHNNSAIT
QVANVKKDDVIYTRVTDGEITSKVVAISRHK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaattcgccatctacctctcgacaaattttaacagtcaccaagctaaatcgc
ttagcccgaaccgtgctagaaggcgaaattggccttatttggctatctgctgaaatttct
aattttgtttgtgccgcgtcaggccattggtactttactctgaaagacaataaagcgcag
gtgaaggctgcgatgtttaaaggtgctaatcgcaatgtacgcatgcgccccaaagaaggg
gataaaattctggtgcgcgcctcggttgggctttatgaagcacgaggcgactaccaatta
gtggtagaacacatggaaagtgatggtgaaggcgcgttaaaacaagcctttgaagcactt
aaagcgcgccttaatacagaaggcttgtttgccacgcaccgcaaacagcctttgcctgag
gctatcaatcgtattggtgtgatcacctccgccagtggggctgccttgcacgatatatta
agtgtattgaaacgccgaagcccccagacagaggttattatttacccctctatggtgcaa
ggtgaaagcgcacctagccaactcattaacgcgttaaccgtggctaatcagcgcaatgaa
gtggacgtgatattactatctcggggaggcggcgctttagaagacttatggtgtttcaat
gatgaaaccttggcccgtcacattgcccaatcaaccttgcccgtagtcagtgcggtgggg
cacgaaatcgactttactatcgctgattttgttgccgatgttagggctcccaccccttct
gcagccgctgaaatactaagtcaggatacgcgagcgctatatcatgcagtcacgcaaaat
aggcagcgtcttgttcgtgccatgcaaacacagattcagcgtgcacaacaaggattaaca
ttacgccagcaaaaattgctttccgtgcatccacaacgccgtattcaacatcaatggcaa
tctttagatagactgcaactgaggttaaagcatgctatggccaacacgttgtctcatgta
gccaagacattggatgacaaaacgcagaagctagctaagcagtcgccgctgctacgaata
gagcgagggcagaacaagttaaaccagttagacaaagccctgaccagcgccatacgaaac
cagttaaaagacaaacagcagttgctaggtgccaaggccggcctacttcactcggttagc
cctctttcgacactttcaaggggctacagcattacattgcacaataattccgcaatcacc
caagtcgcgaatgtaaaaaaggacgatgttatctatacgcgagtgactgacggggaaata
accagtaaagtagtggctatctcacgtcataagtaa
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