Alteromonas sp. B31-7: IUA53_08165
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Entry
IUA53_08165 CDS
T11045
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
altb Alteromonas sp. B31-7
Brite
KEGG Orthology (KO) [BR:
altb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
altb03016
]
IUA53_08165 (truB)
Enzymes [BR:
altb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IUA53_08165 (truB)
Transfer RNA biogenesis [BR:
altb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IUA53_08165 (truB)
Prokaryotic type
IUA53_08165 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QPL51555
LinkDB
All DBs
Position
1927566..1928546
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AA seq
326 aa
AA seq
DB search
MARRRKGRSINGIVLLDKPLGGSSNQLLQKVRWLYKAQKAGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTAKLGVRTTTSDADGEVVEEKPVEVNEAQVNAACLAFLGKSKQ
IPSMFSALKHQGKPLYFYARQGIVIEREPRDIEVYELEVTRLALPYVDMRIKCSKGTYIR
SIVDDLGQNLGCGAYVTRLHRTEVADYPTDKMVSLDTLIETQEALSEGEFEALDAYLIPM
DTAVSRLPYILINDAERARFDNGQSVIGTSVTPLVQGKSYRVYHGEDTQGLFLGVGEAVL
DPKDQGVAKNALYVNPKRRVVYGDEG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagacgcaaaggccgcagtattaatggtattgtgcttttagataagccactc
ggtggttcatcaaatcaactattacagaaagtacgatggttgtataaagcgcaaaaggct
gggcataccggggcactagatccattggcaagcggtatgcttccgctttgtttaggtgaa
gctacgaaattttctcagtttttgttagatgctgaaaaaacctatgaagtcactgctaag
ttaggggtaagaactaccacctctgacgcagacggtgaggtggttgaagaaaagcccgtt
gaggtgaatgaggcgcaagtcaacgcggcgtgtttggcctttctcggtaagagtaagcaa
atcccgtctatgttttctgcgctaaagcaccaggggaagccgctgtatttctatgcacgt
caaggtattgttatcgagcgtgaacccagagatatagaagtgtatgagttagaggtgacg
cgccttgccttgccttatgtcgatatgcgtattaagtgtagtaaagggacttatatccgt
tccatcgttgacgacttagggcagaacttaggctgtggcgcctatgtcacccgattacat
cgtacagaagtggccgattatcctacggataaaatggtgtcattagacacactgatagag
acgcaagaagcgttatctgagggagagtttgaagcccttgatgcctatctaattcccatg
gatacggccgtgagtcggttgccatatatcctcattaacgatgctgaacgcgctcgattc
gataacggccaaagtgtcataggaacttccgttacccctcttgttcaagggaagtcttat
cgtgtttatcacggtgaagatacacaagggctttttttgggcgtgggggaggcggtatta
gaccctaaagaccaaggcgtggcgaaaaacgcgctgtacgtcaaccctaaacgacgcgtg
gtttatggcgacgaaggttag
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