Alteromonas sp. B31-7: IUA53_11005
Help
Entry
IUA53_11005 CDS
T11045
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
altb Alteromonas sp. B31-7
Brite
KEGG Orthology (KO) [BR:
altb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
altb03032
]
IUA53_11005 (topA)
03400 DNA repair and recombination proteins [BR:
altb03400
]
IUA53_11005 (topA)
Enzymes [BR:
altb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IUA53_11005 (topA)
DNA replication proteins [BR:
altb03032
]
Prokaryotic type
DNA Topoisomerases
IUA53_11005 (topA)
DNA repair and recombination proteins [BR:
altb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IUA53_11005 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_LysW
Zn_ribbon_recom
Gp-FAR-1
Zn_ribbon_TFIIB
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QPL48469
UniProt:
A0A7T0RIX2
LinkDB
All DBs
Position
complement(2568113..2570773)
Genome browser
AA seq
886 aa
AA seq
DB search
MAKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTKALGKVEPKKPAKELKTLSDE
ERLEYLRRHEYLKLVDRMGVDPEKDWQAHYQVLQGKEKVVNELKKLAKDADTIYLATDLD
REGEAIAWHLQELLGSKGKTYQRVVFNEITKNAIQDAFSDPGELNISRVNAQQARRFLDR
VVGFMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWDVHADLTSQQQAA
LRMLVAKHQGNAFKPKNKAETDKALAELDGANYQVESRESKPTQSRPSAPFITSTLQQAA
STRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQEALDSARAYISDNFGNKYLPDSPI
RYGSKEGAQEAHEAIRPSNVSIGAASLGDMERDAQRLYELIWRQFVACQMTPAKYDATTI
RVSAGDYELTAKGRVLKFDGWTRVQPQLRKKGDEELMLPDVQKGDVLELKALDPKQHFTK
PVARFNEASLVKELEKRGIGRPSTYASIISTIQDRGYVRLENKRFYAEKMGEIVNDRLME
NFDDLMNYDFTANMEQQLDDIAEGNKNWKDVLNDFYSGFYGKLLNAEKDPEEGGMRLNQA
VPAGIECDKCGREMNVRTASTGVFLGCSGYNLPPKERCTNTMNLTAGDEVVKVDDEEELE
TEALRSKKRCPKCGTAMDSYLVDESRKLHVCGNTPTCDGTLVESGTFKIKGYDGPIIECD
KCGSDMELKNGRFGKYFGCTNEECKNTRKLLRNGEAAPPKEDPVDLPELPCEKSDAHFML
RDGASGIFLAAHNFPKSRETRAPKVEELARFRDRISPKFYYLADAPQKDPEGNPAIVRYS
RKTKQQYVMSENEAGKATGWSAWYDDGKWQEQAAKKPAAKAKAKKK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcactggtcatagtcgagtcaccagccaaagcaaaaacgataaataaatat
ctcggtaaagattttatcgtaaaaagttcggttggccacgtgcgagatcttccaacgaag
gcattaggcaaagttgagcctaaaaaaccggcaaaagaactcaaaactttaagcgatgaa
gagcgactagaatatcttcgtcgtcacgaatatttgaaacttgtcgatcgcatgggtgtt
gacccagaaaaagattggcaagcgcactatcaagtgttgcaaggcaaagaaaaagtggtt
aacgaactcaaaaagttagccaaagacgctgatacgatttatctcgcaacggatttggac
cgtgaaggggaggccatcgcgtggcacttgcaagagttgctaggaagcaaaggtaaaact
taccagcgcgtcgtgttcaacgaaattactaaaaacgcgattcaagatgcgttttctgat
ccgggcgaacttaatatttcccgggtgaatgcacagcaagcacgtcgattcctcgaccgt
gttgttggttttatggtgtcgccactgttatggaaaaaaattgctcgtggcctgtccgca
ggacgagttcaatcggtagctgtacgcttagttgttgagcgtgaacgtgaaattaaagcc
tttgtgcccgaagagttttgggatgtgcacgccgacttaaccagccaacaacaagccgca
ttgcgcatgttggtggcaaaacatcagggcaatgcgtttaagcccaaaaataaagccgaa
acagacaaagcgttggccgagttagatggcgcaaattaccaagttgaaagccgtgagtcg
aaaccgacacaaagccgaccttctgcgccctttataacttctacattacagcaagcggca
agcacacgcttagggtttggcgtgaagaaaaccatgatgatggcccagcgtttatatgaa
gcgggttacatcacctatatgcgtaccgactcaaccaatttgagccaagaagcccttgat
agtgcacgggcgtatatttccgataattttggtaacaagtatttacctgactcgcctatt
cgctatggcagtaaagaaggtgcgcaagaagcgcacgaagctatccgtccttctaacgtt
agcataggagctgccagcctaggcgatatggagcgtgatgctcagcgtctttacgaatta
atttggcgtcaatttgtggcctgccaaatgaccccagcgaaatacgatgcgaccaccatt
cgagtgtctgctggcgactatgaactaacagcgaagggccgcgtacttaagtttgatggt
tggacccgtgttcagcctcaattgcgtaagaaaggcgacgaagagctcatgttgccagac
gttcaaaaaggtgacgtactcgagttaaaagcgttagatcctaagcagcactttaccaag
cctgttgcgcgttttaatgaagcatcactggttaaagagctcgaaaaacgtggtattggt
cgcccatctacctatgcgagtattatttcaaccattcaagatcgcggctatgtgcgttta
gaaaacaaacgtttttatgccgagaaaatgggtgaaattgtgaatgatcgtctcatggaa
aactttgacgatttaatgaattacgactttaccgcaaacatggagcagcaattagatgat
attgctgagggtaataaaaactggaaagacgtgctcaacgacttctacagtggtttttac
ggcaagttactgaacgctgagaaggacccagaagaaggcggtatgcgccttaatcaagcg
gttccagcgggcattgaatgtgataaatgtggccgcgaaatgaacgtacgtaccgcctct
accggggttttccttggatgctctggttacaacttaccgccgaaagagcgctgtacaaac
accatgaaccttaccgctggtgatgaagtggtgaaggttgatgacgaagaagaacttgag
acagaagcgctacgctcgaaaaagcgttgtccaaaatgtggcactgccatggacagctac
ctcgttgatgaatctcgtaaacttcacgtgtgcggcaataccccgacctgtgatggcacc
ttggtagagagtggcaccttcaagattaaaggctatgacggccctattatcgagtgcgat
aaatgtggtagcgacatggagcttaaaaacggccggtttggcaagtattttggctgtacc
aacgaagagtgtaaaaatactcgcaagctgttgcgaaatggcgaagctgcgccaccgaag
gaagatccagtggatttacctgagcttccttgcgagaaatcagatgcccactttatgtta
cgggacggggcgtcaggtatctttttagcggcgcataacttccctaagtcgcgagagaca
cgtgcgccgaaagtggaagagttggctcgctttagggatagaatttcgccgaaattctat
tatcttgcagatgcgccacaaaaggatcctgaaggtaatccggccattgttcgttacagc
cgtaagacaaagcagcagtatgtgatgtcggaaaatgaagctggaaaggccacaggctgg
tcggcgtggtatgacgacggaaaatggcaagagcaggctgcgaaaaagccagctgctaaa
gcgaaagctaagaaaaaatag
DBGET
integrated database retrieval system
