Alteromonas sp. B31-7: IUA53_11135
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Entry
IUA53_11135 CDS
T11045
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
altb Alteromonas sp. B31-7
Pathway
altb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
altb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IUA53_11135 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altb03400
]
IUA53_11135 (sbcB)
Enzymes [BR:
altb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
IUA53_11135 (sbcB)
DNA repair and recombination proteins [BR:
altb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
IUA53_11135 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IUA53_11135 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IUA53_11135 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QPL48486
UniProt:
A0A7T0RIY0
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All DBs
Position
2600899..2602326
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AA seq
475 aa
AA seq
DB search
MHEPSFLWYDFETFGTSPQKDMPCQFAAIRTDSDLNIIGKPINIMSAIANDYLPHPEACL
VTGITPQQTLRDGSNEADFAKRIYEEMATPNTCSVGFNSIRFDDEVARFLFYRNFYDPYA
REWRNGNSRWDIIDVARACYALRPEGINWPTKEDGSPSFKLEALTQANNISHENAHDALS
DVYATIALAKLMKNAQPRLFEYAFSLRIKHNVWQQIDLTKPSVLLHISSKLPARQGCCTW
IMPIAKHPTNGNAVIAIDLSKPVDGLLNDTAEEIKANLYRSQESLGQSSRPGLKLIHVNR
SPFVTTAKAMTQENADRLGLDRDTCLENYRRLSQHTDLALKLSKVFEDGEFDDDQDVDHA
LYSGGFLNDEDRRWCEQVLEATPDALAALSDQTQHPRLKSQLFRYRARNFPNTLTFDEMT
KWQRHRQARLTDAQSPASITLEPYMLRLEQLAQVHSDNPEKQAILRALYQYAENL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaccctcttttctctggtacgattttgaaacgtttggtaccagcccacaaaaa
gacatgccttgccagtttgcggcaattcgcaccgatagcgatctcaacattattggtaaa
cctatcaatatcatgagtgccatcgcgaatgattaccttccccatccagaagcctgtttg
gtcacgggcattactccgcagcaaacccttcgggatggcagtaatgaagccgatttcgct
aagcgcatttacgaggaaatggcgacacctaacacgtgtagtgtggggtttaacagcatt
aggtttgatgatgaagttgctcgttttctgttttaccgaaacttttatgacccctatgcc
agagagtggcgaaatggcaatagccgctgggacatcatcgatgtcgcgagagcttgctat
gccttgcggcctgagggtataaattggccaaccaaagaagatggctcacccagttttaaa
cttgaagcgttaacccaagccaataacatcagccacgagaatgcccacgacgcacttagt
gacgtgtacgccaccattgcgctggcaaagctgatgaaaaacgcccagcccaggctgttt
gaatatgctttttcattgcgtattaagcataatgtatggcagcaaattgaccttaccaag
ccgtctgttttgcttcatatttcgtccaaactccccgcacgtcagggatgctgcacctgg
ataatgccaattgcaaagcacccgactaacggcaatgcggtgattgctattgatttatca
aaacctgtggatggcctactgaatgacaccgcagaagaaataaaagcaaacctttaccgt
tcacaagagtcgttaggacaatcgtcgcggccaggattaaagcttattcatgtaaaccgt
tctccttttgtcaccacggcgaaagccatgacacaagagaatgccgatagactcggctta
gacagagacacctgtttagaaaactaccgccgcctctctcagcacaccgacctcgcccta
aaactctcaaaggtgtttgaagacggtgagtttgatgacgatcaagatgttgatcatgct
ttgtacagcggaggctttttaaacgacgaagacagacgttggtgtgagcaggtattagag
gcgacacctgatgctttagctgcactgagtgatcaaactcagcacccaagattgaaaagc
cagctgtttaggtatcgggcgagaaatttccccaacaccctaacattcgatgaaatgacc
aagtggcagcgccaccggcaagcgcgcttaaccgatgcccagtcaccggcttcaatcacg
ctagagccttatatgctgcgtttagagcagctggctcaagtacacagtgataacccagaa
aaacaagccatactgcgtgcactttatcaatatgctgaaaacctttga
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