Alteromonas sp. B31-7: IUA53_12935
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Entry
IUA53_12935 CDS
T11045
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
altb Alteromonas sp. B31-7
Pathway
altb02024
Quorum sensing
altb03060
Protein export
altb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
altb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IUA53_12935 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IUA53_12935 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IUA53_12935 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
altb02044
]
IUA53_12935 (ffh)
Enzymes [BR:
altb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
IUA53_12935 (ffh)
Secretion system [BR:
altb02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IUA53_12935 (ffh)
Eukaryotic Sec-SRP protein
IUA53_12935 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
cobW
CbiA
AAA_22
KTI12
Peptidase_C23
VirC1
AAA_30
SLFN-g3_helicase
AAA_33
AAA_31
APS_kinase
T2SSE
AAA_19
YqeC
AAA_16
AAA_14
DO-GTPase1
TsaE
Helicase_RecD
Thymidylate_kin
ABC_tran
nSTAND3
AAA_24
ArsA_ATPase
ATP_bind_1
FliD_C
AAA_28
AAA
Motif
Other DBs
NCBI-ProteinID:
QPL48798
LinkDB
All DBs
Position
complement(2997674..2999110)
Genome browser
AA seq
478 aa
AA seq
DB search
MFENLSERLGQTLRNVSGKGRLTEENIKETLREVRMALLEADVALPVVKSFVAQVKERAV
GTEVTKSLKPGQVFIKIVQSELESVMGEANEKLNLATQPPAVILMAGLQGAGKTTSVGKL
AKYLTEREKKKVMVVSADVYRPAAIKQLETLANEVNVAFHPSTILQKPIDIVESAIDEAK
KNFFDVLLVDTAGRLHVDSDMMNEIQELHGAVKPVETLFVVDAMTGQDAANTAKAFNDAL
PLTGVILTKADGDARGGAALSVRHITGKPIKFIGMGEKVDALEPFHPERIASRILGMGDV
LSLIEEVERKVDKSKAEKLAKKVQKGKGFDLQDFKDQLEQMKNMGGMMGMLDKLPGMGAM
TDKIKDQANDKQFNQMEAIINSMTPAERARPEIIKGSRKRRIAAGSGTQIQDVNRLLKQF
TQMQKMMKKMSGGGMKKMMRQMKGMMPPGGGGFGGPGGPGGFGGGPGGFGGGGGFPPR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatttatctgaacgccttggtcaaacgcttcgtaatgtgagcggcaaaggg
cgattgactgaagaaaatattaaagaaaccttacgcgaagtgcgtatggcattactggaa
gccgatgtcgctttgccagtggttaagtcatttgttgcacaagttaaagaacgcgctgta
ggtaccgaagtcaccaaaagccttaagcctggtcaagtttttataaagattgttcaatct
gaacttgaatcagtcatgggggaggctaacgaaaagctcaatctcgccacgcaacctcct
gctgttatcttaatggccggtcttcaaggggcaggtaaaaccacctcggtgggaaaactc
gccaaatacttgaccgagcgcgaaaagaaaaaggttatggtggtgagtgccgacgtttat
cgtccggcagcaattaagcagttagaaacccttgctaacgaagtgaatgttgcttttcat
ccttcaaccattcttcaaaagcctatcgacattgttgaaagtgccatcgatgaagcaaag
aaaaatttcttcgatgtactgctcgtagatacggcgggtcgtttgcatgtcgacagtgac
atgatgaatgaaattcaagaattacatggtgcggttaaaccggtagaaaccttgttcgtg
gttgatgctatgacggggcaagacgcggcgaatacagcgaaggcgtttaatgatgcactt
cctctcactggggttatccttaccaaagcagacggtgatgcccgaggtggtgcggcgctg
tctgttcgccacattaccggtaaacctattaaatttatcggtatgggcgaaaaggtggat
gctcttgagcctttccaccctgagcgtatcgcgtcacgaattttaggcatgggcgatgtg
cttagcctcattgaagaagttgagcgcaaagttgataaatctaaagctgagaagttggcg
aagaaagtccaaaaaggcaaaggctttgacttgcaggactttaaagatcagcttgagcaa
atgaaaaacatgggcggcatgatgggaatgcttgataagcttcctggtatgggggccatg
acggacaaaatcaaagatcaagcgaatgacaagcagtttaatcagatggaagccatcatt
aactcgatgacgccggcagaacgcgcacgacctgaaattatcaaaggttcacgtaaacgc
cgtatagcggctggatctggtacccaaattcaagatgttaatcgtcttttgaagcagttt
acgcaaatgcaaaaaatgatgaagaaaatgtctggtggcggaatgaagaaaatgatgcgc
caaatgaaaggtatgatgcctccaggtggtggcggatttggaggtccaggcggtccaggt
ggattcggcggcggtccaggcggttttggcggaggaggcggtttccctccgcgttag
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