Alteromonas sp. B31-7: IUA53_16475
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Entry
IUA53_16475 CDS
T11045
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
altb Alteromonas sp. B31-7
Pathway
altb03410
Base excision repair
altb03430
Mismatch repair
altb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
altb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IUA53_16475 (recJ)
03430 Mismatch repair
IUA53_16475 (recJ)
03440 Homologous recombination
IUA53_16475 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
altb03400
]
IUA53_16475 (recJ)
DNA repair and recombination proteins [BR:
altb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IUA53_16475 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IUA53_16475 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IUA53_16475 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QPL49412
UniProt:
A0A7T0WHJ8
LinkDB
All DBs
Position
complement(3767243..3768997)
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AA seq
584 aa
AA seq
DB search
MILPIVRRDVEATPLAPHLHPVLNRIYRGRNVHSIDELEHSLKGLTHFNQLKGMHQAATL
LAETVVSGKRLIIVGDFDADGATSTSLCMLALRMMGFDNVDYLVPNRFDFGYGLSVPIVD
VAKQQGAETIMTVDNGIACVEGVAHAKSLGISVLVTDHHLPGDTLPNADAIVNPNQPGCH
FPSKNLAGVGVAFYIMLALKSQLQQQGWFDSQRLPAPNLASLLDIVAVGTVADVVPLDKH
NRILVHQGLQRIRAGQCRPGIRALIDVANRDSAHLTSTDLGFVIGPRLNAAGRLDDMSQG
IACLMEEDAMQARMIAAELDALNRERREIETGMKAQAEQVLEKLNVNEGNIPAALVIYQA
DFHQGVIGIVAGRLKEKYLKPVIAFAHQDDDVIKGSARSIPGIHIRDVLDEVNTKYPQVI
SKFGGHAMAAGLSLPLKNLEAFQQAFVEITQLHMSKLEGHQVLLSDGALSKDELSLSFAH
VLRQAGPFGQGFESPLFDGHFTVVSQRLVGEKHLKLVLRDESVGEIDAIAFNVDLKAWPN
ASVSRVHIAYRLDVNVFRGQESVQLIVEQISEPESTRAENATNR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgatactgccaatcgtgcgccgagacgtagaggccacgccgcttgcgccccacttacac
ccagttctaaaccgtatttaccgcggccgaaatgtgcatagtattgacgagctagagcat
tcgttgaagggcttaacgcatttcaatcagttaaagggtatgcatcaggctgccacgctg
ctagcagaaacggtggtttctgggaaacggttaattatcgtaggcgacttcgatgcggat
ggtgctaccagtacctccttgtgcatgttagccctgcgtatgatggggtttgataatgtc
gattaccttgtgccgaatcgttttgattttggctacgggctgagtgtaccgattgtggat
gtcgctaaacagcagggcgccgaaacaataatgacggtggacaatggcattgcctgtgtt
gagggcgtggcgcatgcgaagagccttggcatctcagtgttagttaccgaccaccattta
cctggcgacaccctgcctaatgccgatgccatagtgaatccgaaccagccaggctgtcac
tttccgtccaaaaacctggctggcgtaggcgtggcgttttacatcatgctggcactaaaa
tcgcagttacagcaacaaggttggtttgatagtcagcgcctgcctgctcccaatttagcc
tcactgctagacatcgttgcggtgggcacggtagcggatgttgttccccttgataaacac
aaccgcattctcgtccatcagggcttgcaacgtattagagctggccaatgtagaccgggt
attcgcgccttgattgatgtagcaaatcgcgacagtgcgcatcttacatcaacagatttg
ggttttgttattggaccaagattaaatgcggcgggcagattagacgatatgtcacaaggc
attgcgtgtttgatggaagaagacgctatgcaagcgcggatgattgccgcagagttagat
gcgcttaaccgagagcgtcgagaaatagaaacgggcatgaaagcacaagccgagcaagtg
cttgaaaagctcaatgttaacgaaggtaatattcccgccgcgcttgtgatatatcaggcc
gatttccatcaaggtgtgattgggattgtggcggggcgactaaaagaaaaatacctaaaa
cctgtgattgcgtttgcgcatcaagatgatgacgtgattaaaggttcggcgcgttccatt
cctggcatccacattcgtgacgtactcgatgaggtcaacaccaagtaccctcaagtgata
agtaaatttggcggtcacgctatggcagctgggctcagtttgcctttaaaaaaccttgag
gcgttccagcaggcttttgtcgaaatcacacaattgcacatgagtaagctagaaggtcat
caagttttacttagcgatggtgcactctcaaaagatgaactcagtttgtcgtttgcccat
gtacttagacaggcaggcccctttgggcaagggtttgaatctccgttgtttgatggtcat
tttaccgtggtgagccagcggctggtgggggagaaacacctcaaattagtactacgggat
gaaagcgtaggcgaaatagatgccattgcatttaatgtagatcttaaagcctggcctaat
gcttcggtctctcgcgtgcacattgcttatcgtcttgacgttaacgtatttcgggggcag
gagtcggtgcaactcattgttgagcagatcagcgagccagagtcgacccgtgcagagaat
gccactaacaggtaa
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