Alteromonas sp. B31-7: IUA53_17640
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Entry
IUA53_17640 CDS
T11045
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
altb Alteromonas sp. B31-7
Pathway
altb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
altb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IUA53_17640 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
altb03019
]
IUA53_17640 (rhlB)
Enzymes [BR:
altb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IUA53_17640 (rhlB)
Messenger RNA biogenesis [BR:
altb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IUA53_17640 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPL49623
LinkDB
All DBs
Position
4030293..4031600
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AA seq
435 aa
AA seq
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MPTHLTDTHFSDLPINSKVVDALTAANFNNCTPIQALALPPLLEGLDIAGQAQTGTGKTI
AFLVATFHHLLSKAENVDNSKSNDAHSAGPRAIIMAPTRELAVQIYNDAKLLSEHTGLSL
GLIYGGEGYESQRETLQEGVDIIIGTTGRILDYYKQNVFSLNNIQVAVLDEADRMFDLGF
IKDIRFLFRRMPAASERLSMLFSATLSYRVQELAYEHMNNPTHVQVAPEQTTASRVSQEL
FYPSDDDKMLLLLTLLEEEWPDKAIVFANTKHSCEKVTDWLTADGHRVGLLSGDVPQKKR
LGILEDFTNGKLDILVATDVAARGLHIDAVTHVFNYDLPDDAEDYVHRIGRTGRAGQSGI
AISFACEKYALNLPDIEKYIQHPIPVTDYDSSALLDDVTAPKPRRKRTPNTRNSSRRGSN
KGRGRGKPSHRGNNN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcacttaactgatactcatttttccgacctgccgattaatagcaaggtggtt
gacgccttgacggcagctaattttaacaactgtacgcctatccaagctctcgctctgccg
cctttacttgaaggcttagacattgcaggacaggcccaaacaggaacgggtaaaaccatt
gcgtttctggtcgctacatttcaccatttgctaagcaaagcagaaaatgtagataacagc
aaatccaatgatgcacattctgcaggccctcgagccatcattatggcccccacccgtgaa
ctcgctgttcaaatctataatgacgccaaattgctcagtgagcataccggattgtcactt
ggtttgatttatgggggcgaaggatacgaaagtcaacgagaaacccttcaagaaggggtg
gatattataattggtacgacagggcgcatactcgattattataaacagaatgtattttca
ctgaataatattcaagttgccgtgcttgatgaagctgacagaatgttcgatttaggcttc
attaaagacatccggtttttgttccgccgcatgcctgccgctagcgaacgtcttagtatg
ttgttctcagccactcttagctaccgcgtacaagaactggcgtatgagcacatgaacaac
cctacccatgtgcaagttgcccctgagcaaaccaccgcaagccgtgtaagccaagagctc
ttttatccgtctgatgacgataaaatgttgcttcttctcactttgcttgaggaagagtgg
ccagacaaggccattgtcttcgcaaatacaaagcacagctgcgaaaaagtgactgactgg
ttaaccgccgatggtcaccgtgtgggcttgctgagtggcgatgttccgcaaaagaaacgc
ttgggtatattggaagacttcacgaatggcaaactggatattttagttgccactgatgtc
gcggcacggggtcttcatattgatgctgtcacccacgtgttcaactatgacttacctgac
gatgctgaagactatgttcaccgcattggccgtacaggtcgggctggacaaagtggtatt
gctattagtttcgcttgtgaaaagtatgccttgaatttaccggatatcgaaaagtatatt
cagcaccctattcccgttaccgactacgacagcagtgctttacttgatgacgtgacagca
ccgaaaccccgtcgtaaacggacaccaaatactagaaactcttctcgtagaggaagtaac
aaagggcgcggaagaggcaagccctcccaccgcgggaacaacaattaa
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